Human Gene LOC440600 (uc001dzj.3) Description and Page Index
  Description: Homo sapiens uncharacterized LOC440600 (LOC440600), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr1:110,828,999-110,881,793 Size: 52,795 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:110,828,999-110,881,793)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.64 RPKM in Brain - Cerebellum
Total median expression: 4.99 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  LF206290 - JP 2014500723-A/13793: Polycomb-Associated Non-Coding RNAs.
MA441867 - JP 2018138019-A/13793: Polycomb-Associated Non-Coding RNAs.
BC053344 - Homo sapiens cDNA clone IMAGE:5166911.
JD091547 - Sequence 72571 from Patent EP1572962.
JD407693 - Sequence 388717 from Patent EP1572962.
JD152374 - Sequence 133398 from Patent EP1572962.
JD258857 - Sequence 239881 from Patent EP1572962.
JD353143 - Sequence 334167 from Patent EP1572962.
JD448683 - Sequence 429707 from Patent EP1572962.
JD180970 - Sequence 161994 from Patent EP1572962.
JD180971 - Sequence 161995 from Patent EP1572962.
LF206291 - JP 2014500723-A/13794: Polycomb-Associated Non-Coding RNAs.
MA441868 - JP 2018138019-A/13794: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_036595
UCSC ID: uc001dzj.3
RefSeq Accession: NR_036595

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_036595.1
exon count: 4CDS single in 3' UTR: no RNA size: 2671
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 429.00frame shift in genome: no % Coverage: 97.68
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.