Human Gene LOC338799 (uc001ube.4) Description and Page Index
  Description: Homo sapiens uncharacterized LOC338799 (LOC338799), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr12:122,233,173-122,241,390 Size: 8,218 Total Exon Count: 7 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:122,233,173-122,241,390)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerGeneNetworkLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 36.20 RPKM in Brain - Cerebellum
Total median expression: 641.84 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC038786 - Homo sapiens hypothetical locus LOC338799, mRNA (cDNA clone IMAGE:5271722).
AK094482 - Homo sapiens cDNA FLJ37163 fis, clone BRACE2026971.
AK095700 - Homo sapiens cDNA FLJ38381 fis, clone FEBRA2003436.
JD172928 - Sequence 153952 from Patent EP1572962.
JD126317 - Sequence 107341 from Patent EP1572962.
JD220970 - Sequence 201994 from Patent EP1572962.
JD166863 - Sequence 147887 from Patent EP1572962.
JD399800 - Sequence 380824 from Patent EP1572962.
JD317491 - Sequence 298515 from Patent EP1572962.
JD275178 - Sequence 256202 from Patent EP1572962.
JD507638 - Sequence 488662 from Patent EP1572962.
AK311480 - Homo sapiens cDNA, FLJ18522.
JD527522 - Sequence 508546 from Patent EP1572962.
JD363263 - Sequence 344287 from Patent EP1572962.
JD216876 - Sequence 197900 from Patent EP1572962.
JD424677 - Sequence 405701 from Patent EP1572962.
JD130324 - Sequence 111348 from Patent EP1572962.
JD492502 - Sequence 473526 from Patent EP1572962.
JD214545 - Sequence 195569 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_002809
UCSC ID: uc001ube.4
RefSeq Accession: NR_002809

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: NR_002809.2
exon count: 7CDS single in 3' UTR: no RNA size: 1521
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 268.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.