Human Gene LINC00114 (uc002yxd.3) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 114 (LINC00114), transcript variant 1, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr21:40,110,879-40,145,401 Size: 34,523 Total Exon Count: 7 Strand: -


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr21:40,110,879-40,145,401)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerHGNCLynx
OMIMPubMedStanford SOURCE

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.18 RPKM in Testis
Total median expression: 0.94 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AY204747 - Homo sapiens chromosome 21 open reading frame 24 isoform 5 (C21orf24) mRNA, complete sequence.
AY204744 - Homo sapiens chromosome 21 open reading frame 24 isoform 1 (C21orf24) mRNA, complete sequence.
AY204750 - Homo sapiens chromosome 21 open reading frame 24 isoform 4 (C21orf24) mRNA, complete sequence.
AY204745 - Homo sapiens chromosome 21 open reading frame 24 isoform 2 (C21orf24) mRNA, complete sequence.
AY204746 - Homo sapiens chromosome 21 open reading frame 24 isoform 3 (C21orf24) mRNA, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_027065
UCSC ID: uc002yxd.3
RefSeq Accession: NR_027065

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_027065.1
exon count: 7CDS single in 3' UTR: no RNA size: 853
ORF size: 0CDS single in intron: no Alignment % ID: 99.88
txCdsPredict score: 200.50frame shift in genome: no % Coverage: 99.88
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.