Human Gene TMEM245 (uc004bds.4) Description and Page Index
  Description: Homo sapiens transmembrane protein 245 (TMEM245), mRNA.
Transcript (Including UTRs)
   Position: hg19 chr9:111,777,415-111,870,850 Size: 93,436 Total Exon Count: 16 Strand: -


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr9:111,777,415-111,870,850)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSCGAPEnsemblEntrez GeneExonPrimerGeneNetwork
H-INVHGNCLynxPubMedStanford SOURCETreefam

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 28.92 RPKM in Adrenal Gland
Total median expression: 620.45 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AF153415 - Homo sapiens chromosome 9 open reading frame 5 mRNA, complete cds.
AK074248 - Homo sapiens cDNA FLJ23668 fis, clone HEP04590.
BC014248 - Homo sapiens chromosome 9 open reading frame 5, mRNA (cDNA clone IMAGE:4635651), partial cds.
AK172815 - Homo sapiens cDNA FLJ23976 fis, clone HEP20473.
AL833960 - Homo sapiens mRNA; cDNA DKFZp434L2417 (from clone DKFZp434L2417).
AK299952 - Homo sapiens cDNA FLJ57827 complete cds.
BC169219 - Synthetic construct Homo sapiens clone IMAGE:9093277 hypothetical protein LOC23731 isoform 1 (C9orf5) gene, partial cds.
AK095537 - Homo sapiens cDNA FLJ38218 fis, clone FCBBF2001291.
AJ420440 - Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1587249.
JD236625 - Sequence 217649 from Patent EP1572962.
JD502965 - Sequence 483989 from Patent EP1572962.
LF354881 - JP 2014500723-A/162384: Polycomb-Associated Non-Coding RNAs.
JD430009 - Sequence 411033 from Patent EP1572962.
JD330911 - Sequence 311935 from Patent EP1572962.
JD296575 - Sequence 277599 from Patent EP1572962.
JD326726 - Sequence 307750 from Patent EP1572962.
JD048780 - Sequence 29804 from Patent EP1572962.
LF354883 - JP 2014500723-A/162386: Polycomb-Associated Non-Coding RNAs.
JD535990 - Sequence 517014 from Patent EP1572962.
JD506452 - Sequence 487476 from Patent EP1572962.
JD318457 - Sequence 299481 from Patent EP1572962.
JD564223 - Sequence 545247 from Patent EP1572962.
JD363520 - Sequence 344544 from Patent EP1572962.
LF354884 - JP 2014500723-A/162387: Polycomb-Associated Non-Coding RNAs.
JD300414 - Sequence 281438 from Patent EP1572962.
JD290710 - Sequence 271734 from Patent EP1572962.
LF354885 - JP 2014500723-A/162388: Polycomb-Associated Non-Coding RNAs.
JD303357 - Sequence 284381 from Patent EP1572962.
JD049067 - Sequence 30091 from Patent EP1572962.
JD094417 - Sequence 75441 from Patent EP1572962.
JD137341 - Sequence 118365 from Patent EP1572962.
JD306199 - Sequence 287223 from Patent EP1572962.
JD533582 - Sequence 514606 from Patent EP1572962.
JD247955 - Sequence 228979 from Patent EP1572962.
JD338880 - Sequence 319904 from Patent EP1572962.
JD552845 - Sequence 533869 from Patent EP1572962.
JD186579 - Sequence 167603 from Patent EP1572962.
JD304140 - Sequence 285164 from Patent EP1572962.
JD368674 - Sequence 349698 from Patent EP1572962.
LF354886 - JP 2014500723-A/162389: Polycomb-Associated Non-Coding RNAs.
JD260271 - Sequence 241295 from Patent EP1572962.
JD419020 - Sequence 400044 from Patent EP1572962.
JD354601 - Sequence 335625 from Patent EP1572962.
JD226291 - Sequence 207315 from Patent EP1572962.
JD313350 - Sequence 294374 from Patent EP1572962.
JD386785 - Sequence 367809 from Patent EP1572962.
JD362623 - Sequence 343647 from Patent EP1572962.
JD436773 - Sequence 417797 from Patent EP1572962.
JD101279 - Sequence 82303 from Patent EP1572962.
JD372977 - Sequence 354001 from Patent EP1572962.
JD304473 - Sequence 285497 from Patent EP1572962.
JD062988 - Sequence 44012 from Patent EP1572962.
JD146658 - Sequence 127682 from Patent EP1572962.
JD198665 - Sequence 179689 from Patent EP1572962.
JD230190 - Sequence 211214 from Patent EP1572962.
JD330229 - Sequence 311253 from Patent EP1572962.
JD350182 - Sequence 331206 from Patent EP1572962.
JD071207 - Sequence 52231 from Patent EP1572962.
JD149480 - Sequence 130504 from Patent EP1572962.
JD366741 - Sequence 347765 from Patent EP1572962.
JD106069 - Sequence 87093 from Patent EP1572962.
JD518058 - Sequence 499082 from Patent EP1572962.
JD149479 - Sequence 130503 from Patent EP1572962.
JD541974 - Sequence 522998 from Patent EP1572962.
JD355615 - Sequence 336639 from Patent EP1572962.
JD361113 - Sequence 342137 from Patent EP1572962.
JD177518 - Sequence 158542 from Patent EP1572962.
JD177519 - Sequence 158543 from Patent EP1572962.
JD180336 - Sequence 161360 from Patent EP1572962.
JD518400 - Sequence 499424 from Patent EP1572962.
JD493379 - Sequence 474403 from Patent EP1572962.
JD079374 - Sequence 60398 from Patent EP1572962.
JD180562 - Sequence 161586 from Patent EP1572962.
JD266726 - Sequence 247750 from Patent EP1572962.
JD422156 - Sequence 403180 from Patent EP1572962.
JD134368 - Sequence 115392 from Patent EP1572962.
JD118438 - Sequence 99462 from Patent EP1572962.
JD322485 - Sequence 303509 from Patent EP1572962.
JD118437 - Sequence 99461 from Patent EP1572962.
JD246509 - Sequence 227533 from Patent EP1572962.
JD351240 - Sequence 332264 from Patent EP1572962.
JD178628 - Sequence 159652 from Patent EP1572962.
JD324523 - Sequence 305547 from Patent EP1572962.
JD080360 - Sequence 61384 from Patent EP1572962.
JD197417 - Sequence 178441 from Patent EP1572962.
JD233198 - Sequence 214222 from Patent EP1572962.
JD279379 - Sequence 260403 from Patent EP1572962.
JD212123 - Sequence 193147 from Patent EP1572962.
JD474038 - Sequence 455062 from Patent EP1572962.
AK090543 - Homo sapiens cDNA FLJ33224 fis, clone ASTRO2001001.
AX746502 - Sequence 27 from Patent EP1308459.
JD564572 - Sequence 545596 from Patent EP1572962.
JD108550 - Sequence 89574 from Patent EP1572962.
JD564571 - Sequence 545595 from Patent EP1572962.
JD556800 - Sequence 537824 from Patent EP1572962.
JD489724 - Sequence 470748 from Patent EP1572962.
JD221029 - Sequence 202053 from Patent EP1572962.
JD314391 - Sequence 295415 from Patent EP1572962.
JD086476 - Sequence 67500 from Patent EP1572962.
JD171771 - Sequence 152795 from Patent EP1572962.
JD251809 - Sequence 232833 from Patent EP1572962.
DQ579930 - Homo sapiens piRNA piR-48042, complete sequence.
JD280789 - Sequence 261813 from Patent EP1572962.
JD299980 - Sequence 281004 from Patent EP1572962.
JD545382 - Sequence 526406 from Patent EP1572962.
JD254459 - Sequence 235483 from Patent EP1572962.
JD155011 - Sequence 136035 from Patent EP1572962.
JD305143 - Sequence 286167 from Patent EP1572962.
JD410237 - Sequence 391261 from Patent EP1572962.
JD510011 - Sequence 491035 from Patent EP1572962.
JD393275 - Sequence 374299 from Patent EP1572962.
JD561840 - Sequence 542864 from Patent EP1572962.
JD247717 - Sequence 228741 from Patent EP1572962.
JD171901 - Sequence 152925 from Patent EP1572962.
JD117973 - Sequence 98997 from Patent EP1572962.
MA590458 - JP 2018138019-A/162384: Polycomb-Associated Non-Coding RNAs.
MA590460 - JP 2018138019-A/162386: Polycomb-Associated Non-Coding RNAs.
MA590461 - JP 2018138019-A/162387: Polycomb-Associated Non-Coding RNAs.
MA590462 - JP 2018138019-A/162388: Polycomb-Associated Non-Coding RNAs.
MA590463 - JP 2018138019-A/162389: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: AL833960, NM_032012
UCSC ID: uc004bds.4
RefSeq Accession: NM_032012

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: yes RNA accession: AL833960.1
exon count: 16CDS single in 3' UTR: no RNA size: 2465
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 1154.00frame shift in genome: no % Coverage: 98.58
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.