Human Gene ECM2 (uc010mqz.2) Description and Page Index
Description: Homo sapiens extracellular matrix protein 2, female organ and adipocyte specific (ECM2), transcript variant 2, mRNA. RefSeq Summary (NM_001197295): ECM2 encodes extracellular matrix protein 2, so named because it shares extensive similarity with known extracelluar matrix proteins. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2010]. Transcript (Including UTRs) Position: hg19 chr9:95,257,594-95,268,731 Size: 11,138 Total Exon Count: 5 Strand: - Coding Region Position: hg19 chr9:95,258,597-95,263,205 Size: 4,609 Coding Exon Count: 2
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
BX537976 - Homo sapiens mRNA; cDNA DKFZp686O0186 (from clone DKFZp686O0186); complete cds. AB011792 - Homo sapiens mRNA for extracellular matrix protein, complete cds. AK303922 - Homo sapiens cDNA FLJ51183 complete cds, highly similar to Extracellular matrix protein 2 precursor. AK298278 - Homo sapiens cDNA FLJ51022 complete cds, highly similar to Extracellular matrix protein 2 precursor. AK296458 - Homo sapiens cDNA FLJ51676 complete cds, highly similar to Extracellular matrix protein 2 precursor. AK312820 - Homo sapiens cDNA, FLJ93257, Homo sapiens extracellular matrix protein 2, female organ andadipocyte specific (ECM2), mRNA. AB527312 - Synthetic construct DNA, clone: pF1KE0009, Homo sapiens ECM2 gene for extracellular matrix protein 2, female organ and adipocyte specific, without stop codon, in Flexi system. AM393123 - Synthetic construct Homo sapiens clone IMAGE:100001929 for hypothetical protein (ECM2 gene). JD545746 - Sequence 526770 from Patent EP1572962. AK308485 - Homo sapiens cDNA, FLJ98526. BC105958 - Homo sapiens extracellular matrix protein 2, female organ and adipocyte specific, mRNA (cDNA clone MGC:126355 IMAGE:40035034), complete cds. BC107493 - Homo sapiens extracellular matrix protein 2, female organ and adipocyte specific, mRNA (cDNA clone MGC:126356 IMAGE:40035036), complete cds. JD313548 - Sequence 294572 from Patent EP1572962. JD341132 - Sequence 322156 from Patent EP1572962. JD434754 - Sequence 415778 from Patent EP1572962. JD038130 - Sequence 19154 from Patent EP1572962. JD486688 - Sequence 467712 from Patent EP1572962. JD284054 - Sequence 265078 from Patent EP1572962. JD291353 - Sequence 272377 from Patent EP1572962.