Human Gene LPP-AS2 (uc021xip.1) Description and Page Index
  Description: Homo sapiens LPP antisense RNA 2 (LPP-AS2), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr3:187,868,994-187,871,876 Size: 2,883 Total Exon Count: 1 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:187,868,994-187,871,876)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerHGNCLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.57 RPKM in Breast - Mammary Tissue
Total median expression: 42.15 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JX046915 - Homo sapiens MYCLo-6 long non-coding RNA, complete sequence.
BC042414 - Homo sapiens hypothetical protein LOC339929, mRNA (cDNA clone IMAGE:4820887).
JD550970 - Sequence 531994 from Patent EP1572962.
JD226327 - Sequence 207351 from Patent EP1572962.
JD135183 - Sequence 116207 from Patent EP1572962.
JD517773 - Sequence 498797 from Patent EP1572962.
JD366587 - Sequence 347611 from Patent EP1572962.
JD185402 - Sequence 166426 from Patent EP1572962.
JD366586 - Sequence 347610 from Patent EP1572962.
JD185401 - Sequence 166425 from Patent EP1572962.
JD366585 - Sequence 347609 from Patent EP1572962.
JD185400 - Sequence 166424 from Patent EP1572962.
JD105991 - Sequence 87015 from Patent EP1572962.
JD517769 - Sequence 498793 from Patent EP1572962.
JD105990 - Sequence 87014 from Patent EP1572962.
JD105992 - Sequence 87016 from Patent EP1572962.
JD517774 - Sequence 498798 from Patent EP1572962.
JD306282 - Sequence 287306 from Patent EP1572962.
JD169605 - Sequence 150629 from Patent EP1572962.
JD133654 - Sequence 114678 from Patent EP1572962.
JD443933 - Sequence 424957 from Patent EP1572962.
JD477921 - Sequence 458945 from Patent EP1572962.
JD144351 - Sequence 125375 from Patent EP1572962.
JX046914 - Homo sapiens MYCLo-5_v2 long non-coding RNA, complete sequence.
JX046913 - Homo sapiens MYCLo-5_v1 long non-coding RNA, complete sequence.
JD373092 - Sequence 354116 from Patent EP1572962.
JD127979 - Sequence 109003 from Patent EP1572962.
JD076466 - Sequence 57490 from Patent EP1572962.
JD173427 - Sequence 154451 from Patent EP1572962.
JD429124 - Sequence 410148 from Patent EP1572962.
JD467713 - Sequence 448737 from Patent EP1572962.
JD196142 - Sequence 177166 from Patent EP1572962.
JD140159 - Sequence 121183 from Patent EP1572962.
JD425773 - Sequence 406797 from Patent EP1572962.
JD058044 - Sequence 39068 from Patent EP1572962.
JD142588 - Sequence 123612 from Patent EP1572962.
JD196141 - Sequence 177165 from Patent EP1572962.
JD140158 - Sequence 121182 from Patent EP1572962.
JD359911 - Sequence 340935 from Patent EP1572962.
JD098940 - Sequence 79964 from Patent EP1572962.
JD485950 - Sequence 466974 from Patent EP1572962.
JD166807 - Sequence 147831 from Patent EP1572962.
JD323256 - Sequence 304280 from Patent EP1572962.
JD361255 - Sequence 342279 from Patent EP1572962.
JD098936 - Sequence 79960 from Patent EP1572962.
JD441984 - Sequence 423008 from Patent EP1572962.
JD482780 - Sequence 463804 from Patent EP1572962.
JD455806 - Sequence 436830 from Patent EP1572962.
JD081087 - Sequence 62111 from Patent EP1572962.
JD554925 - Sequence 535949 from Patent EP1572962.
JD295314 - Sequence 276338 from Patent EP1572962.
JD255666 - Sequence 236690 from Patent EP1572962.
JD217089 - Sequence 198113 from Patent EP1572962.
JD490003 - Sequence 471027 from Patent EP1572962.
JD279719 - Sequence 260743 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_036497
UCSC ID: uc021xip.1
RefSeq Accession: NR_036497

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: NR_036497.1
exon count: 1CDS single in 3' UTR: no RNA size: 2897
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 431.00frame shift in genome: no % Coverage: 99.52
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.