Human Gene LOC646329 (uc022alr.1) Description and Page Index
  Description: Homo sapiens uncharacterized LOC646329 (LOC646329), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr7:130,557,251-130,596,911 Size: 39,661 Total Exon Count: 3 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:130,557,251-130,596,911)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerH-INVLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 3.44 RPKM in Brain - Hypothalamus
Total median expression: 40.38 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  GU321463 - Homo sapiens clone JLM160 microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence, alternatively spliced.
GU321464 - Homo sapiens clone JLM159 microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence, alternatively spliced.
GU321465 - Homo sapiens clone JLM157 microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence, alternatively spliced.
GU321466 - Homo sapiens clone JLM156 microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence, alternatively spliced.
GU321467 - Homo sapiens clone JLM155 microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence, alternatively spliced.
GU321462 - Homo sapiens microRNA mir-29b-1/mir-29a, precursor RNA, complete sequence.
AK095549 - Homo sapiens cDNA FLJ38230 fis, clone FCBBF2004448.
LP896493 - Sequence 1357 from Patent EP3253886.
MG322760 - Homo sapiens Linc-pint lncRNA, partial sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: GU321464
UCSC ID: uc022alr.1
RefSeq Accession: NR_034120

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: GU321464.1
exon count: 3CDS single in 3' UTR: no RNA size: 252
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 302.50frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.