Human Gene CRIP2 (uc031qqt.1) Description and Page Index
  Description: Homo sapiens cysteine-rich protein 2 (CRIP2), transcript variant 6, non-coding RNA.
RefSeq Summary (NR_073083): This gene encodes a putative transcription factor with two LIM zinc-binding domains. The encoded protein may participate in the differentiation of smooth muscle tissue. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2012].
Transcript (Including UTRs)
   Position: hg19 chr14:105,941,112-105,946,507 Size: 5,396 Total Exon Count: 7 Strand: +


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-15

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:105,941,112-105,946,507)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSCGAPEnsemblEntrez GeneExonPrimerH-INV
HGNCLynxOMIMPubMedStanford SOURCEWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 170.17 RPKM in Heart - Atrial Appendage
Total median expression: 1998.80 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK300092 - Homo sapiens cDNA FLJ56946 complete cds, highly similar to Cysteine-rich protein 2.
AK057837 - Homo sapiens cDNA FLJ25108 fis, clone CBR01507.
BC034151 - Homo sapiens cysteine-rich protein 2, mRNA (cDNA clone MGC:32803 IMAGE:4690443), complete cds.
JD195743 - Sequence 176767 from Patent EP1572962.
AK315757 - Homo sapiens cDNA, FLJ96869, Homo sapiens cysteine-rich protein 2 (CRIP2), mRNA.
U36190 - Human cysteine-rich protein 2 (hCRP2) mRNA, complete cds.
BC128101 - Homo sapiens cysteine-rich protein 2, mRNA (cDNA clone MGC:149180 IMAGE:40109449), complete cds.
BC034386 - Homo sapiens cysteine-rich protein 2, mRNA (cDNA clone IMAGE:5198339), with apparent retained intron.
D42123 - Homo sapiens mRNA for cystein-rich protein 2, complete cds.
BC000434 - Homo sapiens cysteine-rich protein 2, mRNA (cDNA clone MGC:8366 IMAGE:2819982), complete cds.
BC001931 - Homo sapiens cysteine-rich protein 2, mRNA (cDNA clone MGC:3996 IMAGE:2819982), complete cds.
DQ894559 - Synthetic construct Homo sapiens clone IMAGE:100009019; FLH176392.01L; RZPDo839C10121D cysteine-rich protein 2 (CRIP2) gene, encodes complete protein.
DQ891382 - Synthetic construct clone IMAGE:100004012; FLH176396.01X; RZPDo839C10122D cysteine-rich protein 2 (CRIP2) gene, encodes complete protein.
AB528485 - Synthetic construct DNA, clone: pF1KB6939, Homo sapiens CRIP2 gene for cysteine-rich protein 2, without stop codon, in Flexi system.
KJ890970 - Synthetic construct Homo sapiens clone ccsbBroadEn_00364 CRIP2 gene, encodes complete protein.
BT019911 - Homo sapiens cysteine-rich protein 2 mRNA, complete cds.
AK223251 - Homo sapiens mRNA for cysteine-rich protein 2 variant, clone: STM06668.
AK091845 - Homo sapiens cDNA FLJ34526 fis, clone HLUNG2007433.
AX747217 - Sequence 742 from Patent EP1308459.
AK311402 - Homo sapiens cDNA, FLJ18444.
JD026057 - Sequence 7081 from Patent EP1572962.
JD034102 - Sequence 15126 from Patent EP1572962.
JD231045 - Sequence 212069 from Patent EP1572962.
JD474642 - Sequence 455666 from Patent EP1572962.
JD283801 - Sequence 264825 from Patent EP1572962.
JD390228 - Sequence 371252 from Patent EP1572962.
JD140984 - Sequence 122008 from Patent EP1572962.
JD161348 - Sequence 142372 from Patent EP1572962.
JD555017 - Sequence 536041 from Patent EP1572962.
JD482175 - Sequence 463199 from Patent EP1572962.
JD447918 - Sequence 428942 from Patent EP1572962.
JD197977 - Sequence 179001 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_073083, uc001yrd.1
UCSC ID: uc031qqt.1
RefSeq Accession: NR_073083

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: NR_073083.1
exon count: 7CDS single in 3' UTR: no RNA size: 1152
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 456.00frame shift in genome: no % Coverage: 98.70
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.