Other Species Alignments for knownGene uc003bgu.2
 
MAF table:

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Species selection:  + - default

  Primate  + -

chimp
gorilla
orangutan
gibbon
rhesus
crab-eating macaque
baboon
green monkey
marmoset
squirrel monkey
bushbaby

  Euarchontoglires  + -

chinese tree shrew
squirrel
lesser Egyptian jerboa
prairie vole
chinese hamster
golden hamster
mouse
rat
naked mole-rat
guinea pig
chinchilla
brush-tailed rat
rabbit
pika

  Laurasiatheria  + -

pig
alpaca
bactrian camel
dolphin
killer whale
tibetan antelope
cow
sheep
domestic goat
horse
white rhinoceros
cat
dog
ferret
panda
pacific walrus
weddell seal
black flying-fox
megabat
david's myotis (bat)
microbat
big brown bat
hedgehog
shrew
star-nosed mole

  Afrotheria  + -

elephant
cape elephant shrew
manatee
cape golden mole
tenrec
aardvark

  Mammal  + -

armadillo
opossum
tasmanian devil
wallaby
platypus

  Birds  + -

saker falcon
peregrine falcon
collared flycatcher
white-throated sparrow
medium ground finch
zebra finch
tibetan ground jay
budgerigar
parrot
scarlet macaw
rock pigeon
mallard duck
chicken
turkey

  Sarcopterygii  + -

american alligator
green seaturtle
painted turtle
chinese softshell turtle
spiny softshell turtle
lizard
x. tropicalis
coelacanth

  Fish  + -

tetraodon
fugu
yellowbelly pufferfish
nile tilapia
princess of Burundi
burton's mouthbreeder
zebra mbuna
pundamilia nyererei
medaka
southern platyfish
stickleback
atlantic cod
zebrafish
mexican tetra (cavefish)
spotted gar
lamprey

For information about output data format see the User's Guide
>uc003bgu.2_hg19 161 chr22:46493807-46505890+
MWPRPRAPPETSGAHRGLGKILRDLTAQVFHPWPPPQVMPEAQGTVSTLRSRSGADLEPLPGAGLPHSELGLLPSWLWRAQPASSTPWGQKLLRWPLLSPSHRASWSAALMPRGHLPSPRMTQDATWVSLAQNEKGRMRETESHLLLPGGAGGPGGGHLWZ
>uc003bgu.2_panTro4 161 chr22:44910065-44922522+
TWPCPRAPPETSGAHRGLGKTLRDLTAQVFHPWPPPQVMPEAQGTVSTLRSGSGADLEPLPGAGLPHSELGLLPSWLWRAQPASSTPWGQKLLHWPLLSPSHRAFWSAALMPRGHLPSPRMTQDATWVSLAQNEKGRMGETESHLLLPGGAGGPGGGHLWZ
>uc003bgu.2_gorGor3 161 chr22:30588749-30600916+
TWPRPRAPPETSGAHRGLGKTFRDLTAQVFHPWPPPQVMPEAQGTVSTLRSRSGADLEPLPGAGLPHSELGLLPSWLWRAQPASSTPWGQKLLRWPLLSPSHRASWSAALMPRGHLPSPGMTQDATWVSLAQNEKGZMRETESHLLLPGGAGGPGGGHLWR
>uc003bgu.2_ponAbe2 161 chr22:41524664-41538022+
TWPRPKALLETSGAHRGLGKTLQDLTAQVFHPWPPPPVTPEAQGTVSTLRSRSGADLEPLPVAGLPHGELGLLPFWLWWARPASSPPRGQKLLQZPLLSCSHRSSWSTAFMPRGHLPSPRMTQDATWVSLAQNKKGQMRETESHLLLPGGAGGPGGGHLWZ
>uc003bgu.2_nomLeu3 161 chr7b:4537296-4549447-
TWPRPRAPPETSGAHRGLGKTLRDLTAQVFHPQSPPQVTPEAQGTVSTLRSRSGADLEPLPVAGLPHSELGVLPSWLWRAQPASSTPWGQKLLRZPLLSPGHWSSWSAALMPRGHLPSPRMTQDATWVSLAQNKKGQMRETESHLLLPGGAGGPGGGHLWZ
>uc003bgu.2_rheMac3 161 chr10:90922218-90934435+
TWPRPRAPPETSGAHRGLGKTLRDLTAQVFHRWPPP-VTPEAQGTVSILRSRRGADLEPLPVAGCPRSELGLLPSWLWRAQPASSAPWGQK-LRZPLLSPSHRSSWKAALMPZGYLPSPRMTQDATWVSLTQNKKGQIRETEZYLLLPGRARGPGRGHLWZ
>uc003bgu.2_macFas5 161 chr10:4846787-4858996-
TWPRPRAPPETSGAHRGLGKTLRDLTAQVFHRWPPP-VTPEAQGTVSILRSRRGADLEPLPVAGCPRSELGLLPSWLWRAQPASSAPWGQK-LRZPLLSPSHRSSWKAALMPZGYLPSPRMTQDATWVSLTQNKKGQIRETESYLLLPGRARGPGRGHLWZ
>uc003bgu.2_papHam1 161 scaffold9913:19450-31796-
TWPHPRAPPETSGAHCGLGKTLRDLTAQVFHPWPPP-VMPEAQGTVSILRSRRGADLEPLPVAGCPRSELGLLPSWLWRAQPASSAPWGQK-LRZPLLSPSHRSSWKAALMPZGYLPSPRMTQDATWVSLTQNKKGQIRETESYLLLPGRARGPGRGHLWZ
>uc003bgu.2_chlSab1 161 chr19:28565625-28578124+
TWPHPGAPPKTSGAHRGLGKTLGDLTAQVFHPWPPT-VMPEAQGTVSTLRSRRGAELELLPVASCPRSELGLLPSWLWRAQPASSAPWGQKPLRZPLLSPSHQSSWNAALMPZGYLPSPRMTQDATWVSLTQNKKGQIRETESYLLLPGRARGPGRGHLWZ
>uc003bgu.2_calJac3 161 chr1:205825948-205837932+
SWSHPRVPPKTSGVHCGRGKTLRDLTAQVFHSZPPRQVTPEGQGTVSTLRSRSGADLELLPVASLPRSELGLLPFWLWRARPASRAPWGQKPL----------------------------------------------------LLQGGAGGPGGEHLWZ
>uc003bgu.2_saiBol1 161 JH378157:2992832-3003767+
MWPHPRVSPETSGAHCGCGKTLWDLAAQVFSSZPPPRVTPEAQGTVSTLRSRSGADLEPLPGASLSRSELGLLPSWLW-----------------------------------------------------------------------------------
>uc003bgu.2_otoGar3 161 GL873526:3399064-3409353-
SP-HPRAPSKK-------GKSLQNSKAQASSSQTLPQLTPEAZV--IVLRSRSGADVELL--A--P-GEQGL-LSL-DKDLCV---LWGQRYL------GGRESAW---LTH-GCLPLTRLTTGATRGSLAZSKKGQVRETEAHLPLKDGGEGLGERGLZZ
>uc003bgu.2_tupChi1 161 KB364447:1960169-1972021-
----PZ-----AGAP-GLQT-LQDPTAQV---QPSS-AAPEARVRVP-LRW-SG-ELKPSPE-----GEQ-LPPSSL-RVQRAL---WGR-SP--SPPPAGS--PSSAILTYLGHLLGIRTDLDA-ZASPAWAKEDLRR-PEPQLLVP-------------
>uc003bgu.2_speTri2 161 JH393439:3756879-3766681-
TW-CPGVPPRRSGAHRGPWKTVQPLVAQVSPP-ZPLQVKPEA--SMS-LRPRVAPRQLLLSTAGLPPSE-GL-DHLLRKACPASRA--GQKVPRZPPLPF-HHSPSSVTPILSPLL-L--PTWDATQVSLTWTKKCH-RETESRLLLPGWA-GPGE---DL
>uc003bgu.2_jacJac1 161 JH725438:70928615-70939484+
IC--SRELPQQMGARRGCLKT-RDL-AQASSPWPLRQVTPEGZ-TVS-PRSGS------LSAA---CGEWGL-PLLFWKGH-ASKALWSL---GKPTLPV-HHSHLRVLPVHPDNLPL--TTADATQESPAZSEKGQVRETESHLPFPSQA-GSGR---ES
>uc003bgu.2_micOch1 161 chr15:25480624-25491483-
TW-CSREPPRKGKASHVYQKTPEDL-TQASSSRQLSQVTSEAQ-TMS-SRSGSGAKQELLHAA-LPCGEZGL-LSFLGRGHPA-RALWGP---RQL---PHHHSLSSVIP------AL--RTC---QESHAZCKEGQMRETELHL-FPGWA-GTGW---WP
>uc003bgu.2_criGri1 161 KE379280:996420-1007093+
TW-CS-EPPRKVKACHMYQKTSYDL-TQASASZQFSQVTPEVQ-TMS-PRSGSDAKQELLCAA-YPCGEWGP-LAFLGRGHPALRGIWKP---RQLSLSPGHHSPSSVILIPPCQLAL--RTC---QENHAWS--GHMRETESHL-FPGWA-GTEG---WP
>uc003bgu.2_mesAur1 161 KB708136:7776287-7786777+
TZ-CS-EPPRKVKACHMYQKTTZDL-TQASASZQFYQVTPEAQ-AMP-PRSGSD-KQELLREV-YPRGEWGP-LAFLGRGHPALRALWKP---RQLSLFPGHHSSPSMILIPPCHLAL--RTC---QGSRVWRKKGQVRE--SHL-FPGWA-GSEG---RP
>uc003bgu.2_mm10 161 chr15:85693538-85704862+
TW-CSZGPPRKVSTWHVYQKTPYGL-TQAPSSZQLPWVTLRTQ-ATS-LRSGSGTKQEVLHAY-LPCGKZGP-MSFLWKGHRALRDLWGPQ-MRSLSLYPHHHLSPSVILLPPGHLVS--RIC---QK-LAZ--KGQMRETEAHL-FPCWA-GTVR---WP
>uc003bgu.2_rn5 161 chr7:126287563-126298932+
TW-CPGGTPRKVSTCRVYQKTPYCL-TQSLSSZQLPQVTLRTQ-TMS-LSSGHGTKQELLHAN-LPCGEZCS-LSLLWKGYPALRGLWGPQ-MRSPSLYPHHHSSPSVILIPPGPLAL--WTC---QE-LAZSKKGQMRETESHL-FPGWA-GTVG---WP
>uc003bgu.2_hetGla2 161 JH602065:3734291-3734346-
VW-CHRAEPAPVGT---------DP-TQ-------------------------------------------------------------------------------------------------------------------------------------
>uc003bgu.2_chiLan1 161 JH721873:30275905-30283683+
VR-GRRAESTA-GT---------DP-TQ----------------------SG-VARRELPSAA-H-----AA-ARLLW-----------------------------------------------------------------------------------
>uc003bgu.2_octDeg1 161 JH651668:2781657-2786714+
----------------------------VFA--RPFPGPPAA--TT--SRSR-VA-WEPLST--------AA-ACLPW-----------------------------------------------------------------------------------
>uc003bgu.2_oryCun2 161 chrUn0230:62931-72134+
RR-HASA-PEPVGV--VHLEPPQD-RAQVSPLRGHFPVMLEAZVTPP--RSGSGGEEGVLVVA-PARGELGP-RS----RVPA--TLWGQEPLREPLLYP-HQSPLS----P-----L--GTDEATQVGLALNNKEHVRETEAQR-LLGWA-APGZ---Q-
>uc003bgu.2_ochPri3 161 JH802099:2378440-2383979-
RR-CAGA-PRTTA---VDLNPPZDFTAQ----------------------Z-SGPEEGALA-T-PAWGEPWP-RRLLQ-----------------------------------------------------------------------------------
>uc003bgu.2_vicPac2 161 KB632589:3274477-3284107-
----------------------------VFSFPAPAPPMPGAWMTVP-SRSRRGAEMELLSEACLPHGELSLLPSWLP-AHP-------------TLLSASHAPPSSVVLI-TGCLP----TZD-T-VSLAWNKKGQIR-T-AHLLLPGRAGGL---GLQW
>uc003bgu.2_camFer1 161 KB016572:949428-959018+
----------------------------VFSFPAPAPLMPGAWMTAP-SRSRRGAEMELLSEAGLPHGELSLLPSWLQ-PHP-------------TLLSASHASPSSVVLI-TGCLP----TZD-T-VSLAWNKKGQMR-T-AHLLLPGRAGGL---GLQW
>uc003bgu.2_turTru2 161 JH472866:66278-78984-
TW-GPRA-PEKVHTCRGLQKTLQDHT-QVSFFPAPPWLTPGARTTVP-LRSRSGTEMERLFEASLTQGEP----LG--------------------LF------PSAAIL--TG-LM----TZD-TRVSLAWN-KGZMRGT-SHLLLP-WAGGR---CLWZ
>uc003bgu.2_orcOrc1 161 KB316952:7949641-7962152+
TW-GPRA-PEKVHTCRGLQKTLQDHT-QVSLVPAPPWLTSGTWTTVP-LRSRSGTEMKLLSEASLTQGEP----LG--------------------LF------PSAAIL--TG-LI----TZD-TRVSLAWN-KGZMRGT-AHLLLP-WAGGR---CLWZ
>uc003bgu.2_panHod1 161 KE111412:183461-192559-
TW----A-SGKLDACRGLRKTLQ----HASSAWTPPQLMPGARMAVP-LRSRSGAEMECLPEASVPHGEP-------------------------------------------------------------------------------------------
>uc003bgu.2_bosTau7 161 chr5:122689998-122698988+
TW-APRA-SRKLDACRGLRKTLQHHV-HASSAPTPPQLAPGARMTVP-LRSRSGAEMECLPEASVPRGEP-------------------------------------------------------------------------------------------
>uc003bgu.2_oviAri3 161 chr3:220562037-220570365+
TW----A-SGKLDACRGL-KTLQ----HASSAWTPPQLMPGARMAVP-LRSRSGAEMECLPEASVPHGEP-------------------------------------------------------------------------------------------
>uc003bgu.2_capHir1 161 chr5:107028191-107036082-
----------------------------ASSAWTPPQLMPGARMAVP-LRSRSGAEMECLPEASVPHGEP-------------------------------------------------------------------------------------------
>uc003bgu.2_equCab2 161 chr28:42001537-42014533+
TW-PPRA-PKKVGTHHGLWKMLRDC--QVSFFQLLPCVTPEARTTVP-LRSKSGGETELLTSAELPHREL-LLPSLLW-ARPASRALWGQESLRZPLLSSSREPPSRVZLIHTGRLP----TZDATQVNLTWNKKGHMRETESH-LLLD---GTGR--LWW
>uc003bgu.2_cerSim1 161 JH767792:7765122-7778903+
TW-RPRA-PRKVGAHRGLWKMLZDR--QVSFFQPLPQVTPEAQTAVS-L---SGAETELLSSAGLPPREL-LPPSLLW-ARPALPGLWGLESPRCPLLSSSCEPPLSELLIYPGCLP----IZGATQASLTZNNKGQMRETESH-LLPGWAGGPGW--LWZ
>uc003bgu.2_felCat5 161 chrB4:140535893-140548911+
TC-HPRA-PTEA-THRGLWETLQDCVAHDSCVPSPLQATPDVQTTAP-LRSRSGVWKGLLSTVGLPRGEQ-PLPTPLC-AHLAWR-LWGQESLREPLGSASREPPSTAILMCLGRPP----AQEAT-VSPAWKNKGRTKEAKRP--FSGWAGGGERGYVWZ
>uc003bgu.2_canFam3 161 chr10:20036233-20048711-
TZ-PPRP-PKEP-THRGLRETLQDHLAQDSFFQPPLQQSPEAQTTVP-LRSRSGADLGLLSTVGLPLSEQ-PLPSLPQ-ALLAFRALWGQQCSRZPL--ASREPRSYAVLTHP--RS----TZDAA-VSLAZNNKGPVKETRAHGPVPGZAGGRRSGCLWZ
>uc003bgu.2_musFur1 161 GL897060:117808-129573-
RZ-HPRV-HKEA-THHGFWETLQDHRTQDP-FLPPLQVTLKMTLTLP-LRSRNGADLGLLSVAGLSRSEQ-LWLAPHW-PHLVLRA-----SWRZPLLSAGREPPSRAVLTHPGHLS----PRDAV-VSLA-NNKGQEKETPSRV---GRAGGGGQGCLWR
>uc003bgu.2_ailMel1 161 GL192962.1:698495-711504-
TZ-HSRA-PKEA-THFGLQETLQDCIAQDSFFLPPLQATPEVTLILP-LRSRSGADLGLLSVVGLPHRE----------AHLALRALWGQQSWRZPLLSASCEPPSSAVLMHPGHLS----TRDAA-VSLA-NNKGQVEEAKSRVLLPGWAGGRWRGCLWW
>uc003bgu.2_odoRosDiv1 161 KB229944:589778-602501-
TZ-HPRA-PKEA-TYRGLRETFQDCRAQDSFFLPPLQVTPA---TLP-LRSS------LLSVVGLPHRAQ-PPPAPRW-AHLASSALWGQQSWRZPLLPASREPPSSSALTHPGHLS----PRDAT-VGPA-SNKGQMKETKS-GLLPGQAGGRGRGCLWG
>uc003bgu.2_lepWed1 161 KB718296:103297-116096-
TZ-HPRA-PKEA-TYRGLREAFQDRRAQDSFFLPPLQVTPA---TLP-LRSR------LLSVVGLPHRAQ-PPPAPRW-AHLASRALWGQQSWRQPLLSASREP-SNAALMHPGHLS----TRDAA-VGPA-SNKGQMEETKSCGLLPGRAGGRGRGCLWG
>uc003bgu.2_pteAle1 161 KB030944:117585-126587-
TC-DPRA-PERA-SHSGLWKMLZERTAQVSFFLPPP-VTPEAZMTVP-LR-RSGTELARLPTVSLPLRGH-LPPARLW-AHPASR------SPRWP-LSTSCEPP-DVPLIHPSRLP----TRDVTRVSLVWSKKSHLWRIKSYL-LPHWAGGLWGGGLWR
>uc003bgu.2_pteVam1 161 scaffold_7110:54651-63499-
TC-DPRA-PERG-SHSGLWKMLZERTAQVSFFLPPP-VTPEAZMTVP-LR-RSGTEVERLPTVSLPLRGH-LLPARLW-AHPASR------SPRWP-LSTSCEPP-DVPLIHPSRLP----TRDVTQVSLVWSKKSHLRRVKSYL-LPHWAGGLWGGGLWR
>uc003bgu.2_myoDav1 161 KB115072:696589-696667-
MW-HPKA---KG-TRHGLREAPLHCPAQ-------------------------------------------------------------------------------------------------------------------------------------
>uc003bgu.2_eptFus1 161 JH977730:2049919-2049995+
-W-RPRA---EG-TRHGLRGTLQRRP-Q-------------------------------------------------------------------------------------------------------------------------------------
>uc003bgu.2_eriEur2 161 JH835849:194991-206180-
MZ-SPWE-PNELGAHHGLWRTCQQPTAQAAFFLPHA-MLSKPQ-TRZ-L------------------------------VHP---GSGGLVSLREP------QTQSSGILRP---PT----TKDL--V--VWDZEGQMRETESH-FYPDWALG--------
>uc003bgu.2_loxAfr3 161 scaffold_102:1337834-1350871+
----------------------------VSSFZT-LPATPGASLMLSVFRSREAAHQEPRPWASLTPTEP-HLSSSLG--------------LRQLPLSSSHQ-SQRA-LMPPGHLPL--STZD-AQVSLAHSKEGPMREIZSYPLLTGWGG------LWZ
>uc003bgu.2_triMan1 161 JH594675:8186363-8199373+
----------------------------VSCFWA-LLAVPGVSTTLPTLRWRETAHHEPRSWASLPPT-P-RLSPSLRKAHPA-KAPZGHRALKQLPPSFSQQLSQRA-LTPPGHLPS--STGDAAEVTLAHSQEGPVRDIZPHPHLPAWGG------LWZ
>uc003bgu.2_chrAsi1 161 JH823353:5132245-5132856-
--------------------------------------------------SKAAAH------AGPPSTEP-LF-LSLW---------WGQESLRH-PFPSSHQLS-----------PS--SIQGTAQVSLAPN------AIWSQPLPPGZGG------Z--
>uc003bgu.2_oryAfe1 161 JH864242:1229695-1242803+
----------------------------VSCSWA-FLRDAGAWAT--LLSSREAA-QEPHP-GDVPPTEL---SLSLRKAHS-----RGQESPRQ-PLSSSZKLSQRT-LHAPGLLPS--TIPDSAQV------KGRMRK-----SVPGRGE------LQZ
>uc003bgu.2_dasNov3 161 JH574071:7562-18250-
TZPCSRARSEMAGAR-GLG--PADG-AQVSFTWH-PQVTP-ARA--PPR---------PLPWGGAPPPEP-----LPKNARP----------P--LALPSGQG--LRS-RRPPAHLPS--RIREATRVSVAWNEKGHRREIEAHPLLPGQAG------PRR
>uc003bgu.2_monDom5 161 chrUn:46263210-46263280-;chr8:89976176-89976218-;chr1:2758168-2758907-
RGPHPNAAST--GSH----KRFRAL--Q-------PQEAPR---AMPRLRLSRGTHQ-RQAAAACQPRQL-----LP-GVQRTLIVSGGTRAQZRSRRVSGRWG--GAGHAHKGY-----MALELAGTGLTGLGMGRAWAPGPPLPLP-------RGQAGG
>uc003bgu.2_ornAna1 161 Contig56072:5947-5987-;Contig4053:19334-19391-;Contig56072:3687-3953-
--------------------------------------------------RGGETQ-E-PLEVGPPHWELGPLKSWLL-GRRALSALRGYSLPHCPLPSS-TQECSRNLLGVRGDLPGAGMSQSPTQTSLAZP--SRSGEPQPDLSLSQQ--------LGW
>uc003bgu.2_falChe1 161 KB397882:1958286-1959013-
EW-GCAV----AITTSELGGALACWHPPIPSAPSLSLLLA-AAQGRC-G----------------------------------------------------------------------------------------------------------------
>uc003bgu.2_falPer1 161 KB391303:444186-444913+
EW-GCAV----AITTSELGGALACWHPPTPSAPSLSLLLA-ATQGRC-G----------------------------------------------------------------------------------------------------------------
>uc003bgu.2_taeGut2 161 chrUn_EQ837229:247364-247411+;chr24:1090823-1091562+
----------------------------NHYPRPLP--------GRP-D----GSP-----APG-----LG---SQ---ALPAPGPRPW-QPQ----------PPFRRGKMDLILPSLSSTNL--MRESMGLY-SELPZLN----IIP-EAG--GGGPLWG
>uc003bgu.2_pseHum1 161 KB221294:501439-501963-;KB221198:19917850-19918501-
GW-AGTG---GT-ALPGLGSAPTC----H-RPRPPP--------GGL-P----GSPL---PASR-----SS---FPPG-ALPA--PLLG-QPP-----------LSRHGZRDLGLQPWG---L--MGMSVGCH--GZVWGH-----ATDESGG-GDGALWG
>uc003bgu.2_allMis1 161 JH737461:316451-329079-
EZ--WTA----A-AAGVPGRGHPRRQP-VPPAAPRARPAAGAAZDGA-G----GPAQ---PAPS-----LG---AGPG-SLPAQSSSASQQHG----------PPWRPGPMGLCPTRLGRTTR--RPEDT--H--AQVWHG----GAA---GG-GNEAFWL
>uc003bgu.2_danRer7 161 Zv9_scaffold3523:10745-20871-
----SEA---RWRAC-----APWDL--------RYPWVACWGQKPL--WSPRREVNPGLL--VRGPZVEQ-RLYCKSR--CAAWVACWGQRPLRGHRLYCSPGZPWVAGQRPQGGGPGGGLSCKSRERGGPMGVEGH--GTLGPL-LQVQGER--VGPLGG