Schema for GRC Incident - GRC Incident Database
  Database: hg38    Primary Table: grcIncidentDb Data last updated: 2018-04-20
Big Bed File: /gbdb/hg38/bbi/grcIncidentDb/hg38.grcIncidentDb.bb
Item Count: 4,490
Format description: GRC incident DB, bigBed 4 + with extra field for detail page
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart168322825Start position in chromosome
chromEnd168416306End position in chromosome
nameHG-2108Short Name of item
description
Category: Variation
Status: Resolved
Detail

Sample Rows
 
chromchromStartchromEndnamedescription
chr1168322825168416306HG-2108Category: VariationStatus: Resolved
chr1169486986169593453HG-1841Category: VariationStatus: Resolved
chr1171088942171249019HG-1705Category: VariationStatus: Resolved
chr1171489753171589640HG-351Category: Clone ProblemStatus: Resolved
chr1186329900186458166HG-368Category: Clone ProblemStatus: Resolved
chr1196623706196992672HG-1341Category: UnknownStatus: Resolved
chr1196772332196841653HG-2485Category: VariationStatus: Awaiting External Info
chr1198370082198725175HG-1145Category: VariationStatus: Resolved
chr1199675962199790021HG-658Category: Localization ProblemStatus: Resolved
chr1201881213201899354HG-356Category: Clone ProblemStatus: Resolved

GRC Incident (grcIncidentDb) Track Description
 

Description

This track shows locations in the human assembly where assembly problems have been noted or resolved, as reported by the Genome Reference Consortium (GRC).

If you would like to report an assembly problem, please use the GRC issue reporting system.

Methods

Data for this track are extracted from the GRC incident database from the specific species *_issues.gff3 file. The track is synchronized once daily to incorporate new updates.

Credits

The data and presentation of this track were prepared by Hiram Clawson.