Multiz Alignments of 100 Vertebrates
 

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Alignment block 1 of 484 in window, 79626102 - 79626106, 5 bps 
B D                     Human  tatca
B D                     Chimp  tatca
B D                   Gorilla  tatca
B D                 Orangutan  tatca
B D                    Gibbon  tatca
B D                    Rhesus  tatca
B D       Crab-eating macaque  tatca
B D                    Baboon  tatca
B D              Green monkey  tatca
B D                  Marmoset  catca
B D           Squirrel monkey  catca
B D                  Squirrel  cactg
       Lesser Egyptian jerboa  tagaa
                 Prairie vole  tgtaa
B D           Chinese hamster  tttaa
               Golden hamster  tttaa
B D                       Rat  attag
B D            Naked mole-rat  tgtta
B D                Guinea pig  tgtta
                   Chinchilla  tgtta
             Brush-tailed rat  tgttg
             Cape golden mole  --ctg
                     Aardvark  tatca
B D                 Armadillo  tatta
             Star-nosed mole  =====
B D                  Hedgehog  =====
B D                     Shrew  =====
B D                  Microbat  =====
B D                    Tenrec  =====
B D                     Mouse  =====
         Cape elephant shrew  =====
B D                     Sheep  =====
            Tibetan antelope  =====
        David's myotis (bat)  =====
          Chinese tree shrew  =====
B D                  Elephant  =====
               Big brown bat  =====
B D                       Cow  =====
B D                  Bushbaby  =====
              Pacific walrus  =====
B D                     Panda  =====
               Domestic goat  =====
                Killer whale  =====
              Bactrian camel  =====
B D                    Alpaca  =====
B D                    Rabbit  =====
B D                       Pig  =====
B D                      Pika  =====
B D                       Dog  =====
B D                       Cat  =====
B D                   Ferret   =====
B D                   Dolphin  =====
                Weddell seal  =====
B D                   Megabat  =====
B D                Coelacanth  =====
B D                    Turkey  =====
B D                   Chicken  =====
  D              Mallard duck  =====
          Tibetan ground jay  =====
B D               Zebra finch  =====
  D    White-throated sparrow  =====
B D           Tasmanian devil  =====
B D             X. tropicalis  =====
  D            Painted turtle  =====
B D        American alligator  =====
B D                Budgerigar  =====
B D                   Opossum  =====
  D               Rock pigeon  =====
  D       Collared flycatcher  =====
B D       Medium ground finch  =====
B D                    Lizard  =====
  D          Peregrine falcon  =====
  D              Saker falcon  =====
B D                   Wallaby  =====
B D                   Manatee  =====
  D           Green seaturtle  =====
  D  Chinese softshell turtle  =====
            Black flying-fox  =====
B D          White rhinoceros  =====
B D                     Horse  =====

Alignment block 2 of 484 in window, 79626107 - 79626110, 4 bps 
B D                     Human  gc-----ta
B D                     Chimp  gc-----ta
B D                   Gorilla  gc-----ta
B D                 Orangutan  gc-----ta
B D                    Gibbon  gc-----ta
B D                    Rhesus  gc-----ta
B D       Crab-eating macaque  gc-----ta
B D                    Baboon  gc-----ta
B D              Green monkey  gc-----ta
B D                  Marmoset  gc-----tg
B D           Squirrel monkey  gc-----ta
B D                  Squirrel  gc-----tc
       Lesser Egyptian jerboa  gc-----tg
                 Prairie vole  at-----ga
B D           Chinese hamster  ac-----ta
               Golden hamster  ac-----ta
B D                       Rat  gt-----a-
B D            Naked mole-rat  gc-----ta
B D                Guinea pig  gc-----ta
                   Chinchilla  gc-----ga
             Brush-tailed rat  gc-----tg
B D                    Rabbit  gc-----tc
             Cape golden mole  tc-------
                     Aardvark  tc-------
B D                 Armadillo  gccattg--
             Star-nosed mole  =========
B D                  Hedgehog  =========
B D                     Shrew  =========
B D                  Microbat  =========
B D                    Tenrec  =========
B D                     Mouse  =========
         Cape elephant shrew  =========
B D                     Sheep  =========
            Tibetan antelope  =========
        David's myotis (bat)  =========
          Chinese tree shrew  =========
B D                  Elephant  =========
               Big brown bat  =========
B D                       Cow  =========
B D                  Bushbaby  =========
              Pacific walrus  =========
B D                     Panda  =========
               Domestic goat  =========
                Killer whale  =========
              Bactrian camel  =========
B D                    Alpaca  =========
B D                       Pig  =========
B D                      Pika  =========
B D                       Dog  =========
B D                       Cat  =========
B D                   Ferret   =========
B D                   Dolphin  =========
                Weddell seal  =========
B D                   Megabat  =========
B D                Coelacanth  =========
B D                    Turkey  =========
B D                   Chicken  =========
  D              Mallard duck  =========
          Tibetan ground jay  =========
B D               Zebra finch  =========
  D    White-throated sparrow  =========
B D           Tasmanian devil  =========
B D             X. tropicalis  =========
  D            Painted turtle  =========
B D        American alligator  =========
B D                Budgerigar  =========
B D                   Opossum  =========
  D               Rock pigeon  =========
  D       Collared flycatcher  =========
B D       Medium ground finch  =========
B D                    Lizard  =========
  D          Peregrine falcon  =========
  D              Saker falcon  =========
B D                   Wallaby  =========
B D                   Manatee  =========
  D           Green seaturtle  =========
  D  Chinese softshell turtle  =========
            Black flying-fox  =========
B D          White rhinoceros  =========
B D                     Horse  =========

Inserts between block 2 and 3 in window
B D                      Rat 2565bp

Alignment block 3 of 484 in window, 79626111 - 79626115, 5 bps 
B D                     Human  --ctgtg
B D                     Chimp  --ctgtg
B D                   Gorilla  --ctgtg
B D                 Orangutan  --ctgtg
B D                    Gibbon  --ctgtg
B D                    Rhesus  --ctgtg
B D       Crab-eating macaque  --ctgtg
B D                    Baboon  --ctgtg
B D              Green monkey  --ctgtg
B D                  Marmoset  --ctgtg
B D           Squirrel monkey  --ctgtg
B D                  Squirrel  --ctaga
       Lesser Egyptian jerboa  --ctgtg
                 Prairie vole  --ctacg
B D           Chinese hamster  --ctaca
               Golden hamster  --ctaca
B D            Naked mole-rat  --ctgtg
B D                Guinea pig  --ctgtg
                   Chinchilla  --tggtg
             Brush-tailed rat  --ctgtg
B D                    Rabbit  --ttgtg
B D                  Elephant  --ctg--
             Cape golden mole  -attg--
                     Aardvark  -aatg--
B D                 Armadillo  tgcta--
             Star-nosed mole  =======
B D                  Hedgehog  =======
B D                     Shrew  =======
B D                  Microbat  =======
B D                    Tenrec  =======
B D                       Rat  =======
B D                     Mouse  =======
         Cape elephant shrew  =======
B D                     Sheep  =======
            Tibetan antelope  =======
        David's myotis (bat)  =======
          Chinese tree shrew  =======
               Big brown bat  =======
B D                       Cow  =======
B D                  Bushbaby  =======
              Pacific walrus  =======
B D                     Panda  =======
               Domestic goat  =======
                Killer whale  =======
              Bactrian camel  =======
B D                    Alpaca  =======
B D                       Pig  =======
B D                      Pika  =======
B D                       Dog  =======
B D                       Cat  =======
B D                   Ferret   =======
B D                   Dolphin  =======
                Weddell seal  =======
B D                   Megabat  =======
B D                Coelacanth  =======
B D                    Turkey  =======
B D                   Chicken  =======
  D              Mallard duck  =======
          Tibetan ground jay  =======
B D               Zebra finch  =======
  D    White-throated sparrow  =======
B D           Tasmanian devil  =======
B D             X. tropicalis  =======
  D            Painted turtle  =======
B D        American alligator  =======
B D                Budgerigar  =======
B D                   Opossum  =======
  D               Rock pigeon  =======
  D       Collared flycatcher  =======
B D       Medium ground finch  =======
B D                    Lizard  =======
  D          Peregrine falcon  =======
  D              Saker falcon  =======
B D                   Wallaby  =======
B D                   Manatee  =======
  D           Green seaturtle  =======
  D  Chinese softshell turtle  =======
            Black flying-fox  =======
B D          White rhinoceros  =======
B D                     Horse  =======

Inserts between block 3 and 4 in window
      Lesser Egyptian jerboa 1592bp

Alignment block 4 of 484 in window, 79626116 - 79626118, 3 bps 
B D                     Human  gaa
B D                     Chimp  gaa
B D                   Gorilla  gaa
B D                 Orangutan  gaa
B D                    Gibbon  gaa
B D                    Rhesus  gaa
B D       Crab-eating macaque  gaa
B D                    Baboon  gaa
B D              Green monkey  gaa
B D                  Marmoset  gaa
B D           Squirrel monkey  gaa
B D                  Squirrel  gca
                 Prairie vole  tta
B D           Chinese hamster  tta
               Golden hamster  tta
B D            Naked mole-rat  gaa
B D                Guinea pig  gaa
                   Chinchilla  gga
             Brush-tailed rat  gaa
B D                    Rabbit  gga
B D                  Elephant  gaa
             Cape golden mole  gaa
                     Aardvark  gaa
B D                 Armadillo  ggc
             Star-nosed mole  ===
B D                  Hedgehog  ===
B D                     Shrew  ===
B D                  Microbat  ===
B D                    Tenrec  ===
B D                       Rat  ===
B D                     Mouse  ===
      Lesser Egyptian jerboa  ===
         Cape elephant shrew  ===
B D                     Sheep  ===
            Tibetan antelope  ===
        David's myotis (bat)  ===
          Chinese tree shrew  ===
               Big brown bat  ===
B D                       Cow  ===
B D                  Bushbaby  ===
              Pacific walrus  ===
B D                     Panda  ===
               Domestic goat  ===
                Killer whale  ===
              Bactrian camel  ===
B D                    Alpaca  ===
B D                       Pig  ===
B D                      Pika  ===
B D                       Dog  ===
B D                       Cat  ===
B D                   Ferret   ===
B D                   Dolphin  ===
                Weddell seal  ===
B D                   Megabat  ===
B D                Coelacanth  ===
B D                    Turkey  ===
B D                   Chicken  ===
  D              Mallard duck  ===
          Tibetan ground jay  ===
B D               Zebra finch  ===
  D    White-throated sparrow  ===
B D           Tasmanian devil  ===
B D             X. tropicalis  ===
  D            Painted turtle  ===
B D        American alligator  ===
B D                Budgerigar  ===
B D                   Opossum  ===
  D               Rock pigeon  ===
  D       Collared flycatcher  ===
B D       Medium ground finch  ===
B D                    Lizard  ===
  D          Peregrine falcon  ===
  D              Saker falcon  ===
B D                   Wallaby  ===
B D                   Manatee  ===
  D           Green seaturtle  ===
  D  Chinese softshell turtle  ===
            Black flying-fox  ===
B D          White rhinoceros  ===
B D                     Horse  ===

Inserts between block 4 and 5 in window
            Brush-tailed rat 1686bp
            Cape golden mole 1bp
B D                Armadillo 1680bp

Alignment block 5 of 484 in window, 79626119 - 79626121, 3 bps 
B D                     Human  agc
B D                     Chimp  agc
B D                   Gorilla  agc
B D                 Orangutan  agc
B D                    Gibbon  agc
B D                    Rhesus  agc
B D       Crab-eating macaque  agc
B D                    Baboon  agc
B D              Green monkey  agc
B D                  Marmoset  agc
B D           Squirrel monkey  aga
B D                  Squirrel  ggc
                 Prairie vole  ggt
B D           Chinese hamster  agt
               Golden hamster  ggt
B D            Naked mole-rat  gg-
B D                Guinea pig  -g-
                   Chinchilla  -g-
             Star-nosed mole  ===
B D                  Hedgehog  ===
B D                     Shrew  ===
B D                 Armadillo  ===
B D                  Microbat  ===
B D                    Tenrec  ===
B D                       Rat  ===
B D                     Mouse  ===
            Brush-tailed rat  ===
      Lesser Egyptian jerboa  ===
         Cape elephant shrew  ===
B D                     Sheep  ===
            Cape golden mole  ===
            Tibetan antelope  ===
        David's myotis (bat)  ===
          Chinese tree shrew  ===
B D                  Elephant  ---
               Big brown bat  ===
B D                       Cow  ===
B D                  Bushbaby  ===
              Pacific walrus  ===
B D                     Panda  ===
               Domestic goat  ===
                Killer whale  ===
              Bactrian camel  ===
B D                    Alpaca  ===
B D                    Rabbit  ---
B D                       Pig  ===
B D                      Pika  ===
B D                       Dog  ===
B D                       Cat  ===
B D                   Ferret   ===
B D                   Dolphin  ===
                Weddell seal  ===
B D                   Megabat  ===
B D                Coelacanth  ===
                    Aardvark  ---
B D                    Turkey  ===
B D                   Chicken  ===
  D              Mallard duck  ===
          Tibetan ground jay  ===
B D               Zebra finch  ===
  D    White-throated sparrow  ===
B D           Tasmanian devil  ===
B D             X. tropicalis  ===
  D            Painted turtle  ===
B D        American alligator  ===
B D                Budgerigar  ===
B D                   Opossum  ===
  D               Rock pigeon  ===
  D       Collared flycatcher  ===
B D       Medium ground finch  ===
B D                    Lizard  ===
  D          Peregrine falcon  ===
  D              Saker falcon  ===
B D                   Wallaby  ===
B D                   Manatee  ===
  D           Green seaturtle  ===
  D  Chinese softshell turtle  ===
            Black flying-fox  ===
B D          White rhinoceros  ===
B D                     Horse  ===

Inserts between block 5 and 6 in window
B D           Naked mole-rat 1720bp
B D               Guinea pig 3bp
                  Chinchilla 1766bp

Alignment block 6 of 484 in window, 79626122 - 79626122, 1 bps 
B D                     Human  a
B D                     Chimp  a
B D                   Gorilla  a
B D                 Orangutan  a
B D                    Gibbon  a
B D                    Rhesus  a
B D       Crab-eating macaque  a
B D                    Baboon  a
B D              Green monkey  a
B D                  Marmoset  a
B D           Squirrel monkey  a
B D                  Squirrel  a
                 Prairie vole  a
B D           Chinese hamster  a
               Golden hamster  a
B D                    Rabbit  a
B D                 Armadillo  a
             Star-nosed mole  =
B D                  Hedgehog  =
B D                     Shrew  =
B D                  Microbat  =
B D                    Tenrec  =
B D                       Rat  =
B D                     Mouse  =
                  Chinchilla  =
            Brush-tailed rat  =
B D                Guinea pig  =
B D            Naked mole-rat  =
      Lesser Egyptian jerboa  =
         Cape elephant shrew  =
B D                     Sheep  =
            Cape golden mole  =
            Tibetan antelope  =
        David's myotis (bat)  =
          Chinese tree shrew  =
B D                  Elephant  -
               Big brown bat  =
B D                       Cow  =
B D                  Bushbaby  =
              Pacific walrus  =
B D                     Panda  =
               Domestic goat  =
                Killer whale  =
              Bactrian camel  =
B D                    Alpaca  =
B D                       Pig  =
B D                      Pika  =
B D                       Dog  =
B D                       Cat  =
B D                   Ferret   =
B D                   Dolphin  =
                Weddell seal  =
B D                   Megabat  =
B D                Coelacanth  =
                    Aardvark  -
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
B D                   Manatee  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =
            Black flying-fox  =
B D          White rhinoceros  =
B D                     Horse  =

Alignment block 7 of 484 in window, 79626123 - 79626123, 1 bps 
B D                     Human  g
B D                     Chimp  g
B D                   Gorilla  g
B D                 Orangutan  g
B D                    Gibbon  g
B D                    Rhesus  g
B D       Crab-eating macaque  g
B D                    Baboon  g
B D              Green monkey  g
B D                  Marmoset  g
B D           Squirrel monkey  a
B D                  Squirrel  g
                 Prairie vole  g
B D           Chinese hamster  g
               Golden hamster  g
B D                    Rabbit  t
B D                   Manatee  g
B D                 Armadillo  g
             Star-nosed mole  =
B D                  Hedgehog  =
B D                     Shrew  =
B D                  Microbat  =
B D                    Tenrec  =
B D                       Rat  =
B D                     Mouse  =
                  Chinchilla  =
            Brush-tailed rat  =
B D                Guinea pig  =
B D            Naked mole-rat  =
      Lesser Egyptian jerboa  =
         Cape elephant shrew  =
B D                     Sheep  =
            Cape golden mole  =
            Tibetan antelope  =
        David's myotis (bat)  =
          Chinese tree shrew  =
B D                  Elephant  -
               Big brown bat  =
B D                       Cow  =
B D                  Bushbaby  =
              Pacific walrus  =
B D                     Panda  =
               Domestic goat  =
                Killer whale  =
              Bactrian camel  =
B D                    Alpaca  =
B D                       Pig  =
B D                      Pika  =
B D                       Dog  =
B D                       Cat  =
B D                   Ferret   =
B D                   Dolphin  =
                Weddell seal  =
B D                   Megabat  =
B D                Coelacanth  =
                    Aardvark  -
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =
            Black flying-fox  =
B D          White rhinoceros  =
B D                     Horse  =

Inserts between block 7 and 8 in window
B D                 Squirrel 1bp
                Prairie vole 2404bp
B D          Chinese hamster 1bp
              Golden hamster 1bp
B D                   Rabbit 2bp

Alignment block 8 of 484 in window, 79626124 - 79626125, 2 bps 
B D                     Human  --gc
B D                     Chimp  --gc
B D                   Gorilla  --gc
B D                 Orangutan  --gc
B D                    Gibbon  --gc
B D                    Rhesus  --gc
B D       Crab-eating macaque  --gc
B D                    Baboon  --gc
B D              Green monkey  --gc
B D                  Marmoset  --gc
B D           Squirrel monkey  --gc
B D                  Squirrel  --a-
B D           Chinese hamster  --a-
               Golden hamster  --a-
B D                Guinea pig  --a-
B D                   Manatee  aa--
B D                 Armadillo  aa--
             Star-nosed mole  ====
B D                  Hedgehog  ====
B D                     Shrew  ====
B D                  Microbat  ====
B D                    Tenrec  ====
                Prairie vole  ====
B D                       Rat  ====
B D                     Mouse  ====
                  Chinchilla  ====
            Brush-tailed rat  ====
B D            Naked mole-rat  ====
      Lesser Egyptian jerboa  ====
         Cape elephant shrew  ====
B D                     Sheep  ====
            Cape golden mole  ====
            Tibetan antelope  ====
        David's myotis (bat)  ====
          Chinese tree shrew  ====
B D                  Elephant  ----
               Big brown bat  ====
B D                       Cow  ====
B D                  Bushbaby  ====
              Pacific walrus  ====
B D                     Panda  ====
               Domestic goat  ====
                Killer whale  ====
              Bactrian camel  ====
B D                    Alpaca  ====
B D                    Rabbit  ====
B D                       Pig  ====
B D                      Pika  ====
B D                       Dog  ====
B D                       Cat  ====
B D                   Ferret   ====
B D                   Dolphin  ====
                Weddell seal  ====
B D                   Megabat  ====
B D                Coelacanth  ====
                    Aardvark  ----
B D                    Turkey  ====
B D                   Chicken  ====
  D              Mallard duck  ====
          Tibetan ground jay  ====
B D               Zebra finch  ====
  D    White-throated sparrow  ====
B D           Tasmanian devil  ====
B D             X. tropicalis  ====
  D            Painted turtle  ====
B D        American alligator  ====
B D                Budgerigar  ====
B D                   Opossum  ====
  D               Rock pigeon  ====
  D       Collared flycatcher  ====
B D       Medium ground finch  ====
B D                    Lizard  ====
  D          Peregrine falcon  ====
  D              Saker falcon  ====
B D                   Wallaby  ====
  D           Green seaturtle  ====
  D  Chinese softshell turtle  ====
            Black flying-fox  ====
B D          White rhinoceros  ====
B D                     Horse  ====

Inserts between block 8 and 9 in window
B D          Chinese hamster 2414bp

Alignment block 9 of 484 in window, 79626126 - 79626132, 7 bps 
B D                     Human  tggtctg
B D                     Chimp  tggtctg
B D                   Gorilla  tggtctg
B D                 Orangutan  tggtatg
B D                    Gibbon  tcgtctg
B D                    Rhesus  tggtctg
B D       Crab-eating macaque  tggtctg
B D                    Baboon  tggtctg
B D              Green monkey  tggtctg
B D                  Marmoset  tgatctg
B D           Squirrel monkey  tgatcta
B D                  Bushbaby  tgacctg
B D                  Squirrel  -----tt
B D           Chinese hamster  -----tg
               Golden hamster  -----tt
B D                Guinea pig  -----ag
                   Chinchilla  -----tg
             Brush-tailed rat  -----tg
B D                    Rabbit  ---ccta
B D                  Elephant  tgaccta
B D                   Manatee  tgaccta
             Cape golden mole  -gaccaa
                     Aardvark  tgacct-
B D                 Armadillo  tgaccta
             Star-nosed mole  =======
B D                  Hedgehog  =======
B D                     Shrew  =======
B D                  Microbat  =======
B D                    Tenrec  =======
                Prairie vole  =======
B D                       Rat  =======
B D                     Mouse  =======
B D            Naked mole-rat  =======
      Lesser Egyptian jerboa  =======
         Cape elephant shrew  =======
B D                     Sheep  =======
            Tibetan antelope  =======
        David's myotis (bat)  =======
          Chinese tree shrew  =======
               Big brown bat  =======
B D                       Cow  =======
              Pacific walrus  =======
B D                     Panda  =======
               Domestic goat  =======
                Killer whale  =======
              Bactrian camel  =======
B D                    Alpaca  =======
B D                       Pig  =======
B D                      Pika  =======
B D                       Dog  =======
B D                       Cat  =======
B D                   Ferret   =======
B D                   Dolphin  =======
                Weddell seal  =======
B D                   Megabat  =======
B D                Coelacanth  =======
B D                    Turkey  =======
B D                   Chicken  =======
  D              Mallard duck  =======
          Tibetan ground jay  =======
B D               Zebra finch  =======
  D    White-throated sparrow  =======
B D           Tasmanian devil  =======
B D             X. tropicalis  =======
  D            Painted turtle  =======
B D        American alligator  =======
B D                Budgerigar  =======
B D                   Opossum  =======
  D               Rock pigeon  =======
  D       Collared flycatcher  =======
B D       Medium ground finch  =======
B D                    Lizard  =======
  D          Peregrine falcon  =======
  D              Saker falcon  =======
B D                   Wallaby  =======
  D           Green seaturtle  =======
  D  Chinese softshell turtle  =======
            Black flying-fox  =======
B D          White rhinoceros  =======
B D                     Horse  =======

Inserts between block 9 and 10 in window
B D                 Squirrel 5bp
B D          Chinese hamster 5bp
              Golden hamster 2457bp
B D               Guinea pig 5bp
                  Chinchilla 5bp
            Brush-tailed rat 5bp

Alignment block 10 of 484 in window, 79626133 - 79626133, 1 bps 
B D                     Human  a
B D                     Chimp  a
B D                   Gorilla  a
B D                 Orangutan  a
B D                    Gibbon  a
B D                    Rhesus  a
B D       Crab-eating macaque  a
B D                    Baboon  a
B D              Green monkey  a
B D                  Marmoset  a
B D           Squirrel monkey  a
B D                  Bushbaby  a
B D                  Squirrel  a
B D           Chinese hamster  a
               Golden hamster  a
B D                Guinea pig  a
                   Chinchilla  g
             Brush-tailed rat  c
B D                    Rabbit  a
B D                  Elephant  a
B D                   Manatee  a
             Cape golden mole  a
                     Aardvark  a
B D                 Armadillo  a
             Star-nosed mole  =
B D                  Hedgehog  =
B D                     Shrew  =
B D                  Microbat  =
B D                    Tenrec  =
                Prairie vole  =
B D                       Rat  =
B D                     Mouse  =
B D            Naked mole-rat  =
      Lesser Egyptian jerboa  =
         Cape elephant shrew  =
B D                     Sheep  =
            Tibetan antelope  =
        David's myotis (bat)  =
          Chinese tree shrew  =
               Big brown bat  =
B D                       Cow  =
              Pacific walrus  =
B D                     Panda  =
               Domestic goat  =
                Killer whale  =
              Bactrian camel  =
B D                    Alpaca  =
B D                       Pig  =
B D                      Pika  =
B D                       Dog  =
B D                       Cat  =
B D                   Ferret   =
B D                   Dolphin  =
                Weddell seal  =
B D                   Megabat  =
B D                Coelacanth  =
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =
            Black flying-fox  =
B D          White rhinoceros  =
B D                     Horse  =

Inserts between block 10 and 11 in window
B D               Guinea pig 1742bp

Alignment block 11 of 484 in window, 79626134 - 79626141, 8 bps 
B D                     Human  agca-----ggat
B D                     Chimp  agca-----ggat
B D                   Gorilla  agca-----ggat
B D                 Orangutan  agca-----ggat
B D                    Gibbon  agca-----cgat
B D                    Rhesus  agca-----ggat
B D       Crab-eating macaque  agca-----ggat
B D                    Baboon  agca-----ggat
B D              Green monkey  agca-----ggat
B D                  Marmoset  agca-----ggat
B D           Squirrel monkey  agca-----ggat
B D                  Bushbaby  agca-----ggat
B D                  Squirrel  ggtccccctagat
B D           Chinese hamster  ggca-----ggat
               Golden hamster  ggta-----ggat
B D                Guinea pig  agca-----ggac
                   Chinchilla  agca-----ggac
             Brush-tailed rat  aaca-----gaac
B D                    Rabbit  agcc-----agat
B D                  Elephant  agca-----ggac
B D                   Manatee  agca-----ggac
             Cape golden mole  agca-----ggac
                     Aardvark  agta-----ggac
B D                 Armadillo  agca-----agaa
             Star-nosed mole  =============
B D                  Hedgehog  =============
B D                     Shrew  =============
B D                  Microbat  =============
B D                    Tenrec  =============
                Prairie vole  =============
B D                       Rat  =============
B D                     Mouse  =============
B D            Naked mole-rat  =============
      Lesser Egyptian jerboa  =============
         Cape elephant shrew  =============
B D                     Sheep  =============
            Tibetan antelope  =============
        David's myotis (bat)  =============
          Chinese tree shrew  =============
               Big brown bat  =============
B D                       Cow  =============
              Pacific walrus  =============
B D                     Panda  =============
               Domestic goat  =============
                Killer whale  =============
              Bactrian camel  =============
B D                    Alpaca  =============
B D                       Pig  =============
B D                      Pika  =============
B D                       Dog  =============
B D                       Cat  =============
B D                   Ferret   =============
B D                   Dolphin  =============
                Weddell seal  =============
B D                   Megabat  =============
B D                Coelacanth  =============
B D                    Turkey  =============
B D                   Chicken  =============
  D              Mallard duck  =============
          Tibetan ground jay  =============
B D               Zebra finch  =============
  D    White-throated sparrow  =============
B D           Tasmanian devil  =============
B D             X. tropicalis  =============
  D            Painted turtle  =============
B D        American alligator  =============
B D                Budgerigar  =============
B D                   Opossum  =============
  D               Rock pigeon  =============
  D       Collared flycatcher  =============
B D       Medium ground finch  =============
B D                    Lizard  =============
  D          Peregrine falcon  =============
  D              Saker falcon  =============
B D                   Wallaby  =============
  D           Green seaturtle  =============
  D  Chinese softshell turtle  =============
            Black flying-fox  =============
B D          White rhinoceros  =============
B D                     Horse  =============

Alignment block 12 of 484 in window, 79626142 - 79626153, 12 bps 
B D                     Human  -catt---aacct---gaa
B D                     Chimp  -catt---aacct---gaa
B D                   Gorilla  -catt---aacct---gaa
B D                 Orangutan  -catt---aacct---gaa
B D                    Gibbon  -catt---aacct---gaa
B D                    Rhesus  -catt---aactt---gaa
B D       Crab-eating macaque  -catt---aactt---gaa
B D                    Baboon  -catt---aactt---gaa
B D              Green monkey  -catt---aactt---gaa
B D                  Marmoset  -gatt---aactt---gat
B D           Squirrel monkey  -gtgtcagaactt---gac
B D                  Bushbaby  -ttct---atctt---gca
B D                  Squirrel  -ggcc---accct---cat
B D           Chinese hamster  -gctt---tcctt---ggg
               Golden hamster  -gctt---tcctt---ggc
B D                Guinea pig  -tctt---cacct---gca
                   Chinchilla  -tctt---cacct---gta
             Brush-tailed rat  -ttgt---cacct---gta
B D                    Rabbit  -catt---aactt---gca
B D                      Pika  -caat---gacctgaagca
B D                  Elephant  ctttt---aactt---gaa
B D                   Manatee  ttttt---aactt---gaa
             Cape golden mole  a-ttt---aactc---aaa
                     Aardvark  tttgt---aactt---aaa
B D                 Armadillo  ttctt---ggctt---gat
             Star-nosed mole  ===================
B D                  Hedgehog  ===================
B D                     Shrew  ===================
B D                  Microbat  ===================
B D                    Tenrec  ===================
                Prairie vole  ===================
B D                       Rat  ===================
B D                     Mouse  ===================
B D            Naked mole-rat  ===================
      Lesser Egyptian jerboa  ===================
         Cape elephant shrew  ===================
B D                     Sheep  ===================
            Tibetan antelope  ===================
        David's myotis (bat)  ===================
          Chinese tree shrew  ===================
               Big brown bat  ===================
B D                       Cow  ===================
              Pacific walrus  ===================
B D                     Panda  ===================
               Domestic goat  ===================
                Killer whale  ===================
              Bactrian camel  ===================
B D                    Alpaca  ===================
B D                       Pig  ===================
B D                       Dog  ===================
B D                       Cat  ===================
B D                   Ferret   ===================
B D                   Dolphin  ===================
                Weddell seal  ===================
B D                   Megabat  ===================
B D                Coelacanth  ===================
B D                    Turkey  ===================
B D                   Chicken  ===================
  D              Mallard duck  ===================
          Tibetan ground jay  ===================
B D               Zebra finch  ===================
  D    White-throated sparrow  ===================
B D           Tasmanian devil  ===================
B D             X. tropicalis  ===================
  D            Painted turtle  ===================
B D        American alligator  ===================
B D                Budgerigar  ===================
B D                   Opossum  ===================
  D               Rock pigeon  ===================
  D       Collared flycatcher  ===================
B D       Medium ground finch  ===================
B D                    Lizard  ===================
  D          Peregrine falcon  ===================
  D              Saker falcon  ===================
B D                   Wallaby  ===================
  D           Green seaturtle  ===================
  D  Chinese softshell turtle  ===================
            Black flying-fox  ===================
B D          White rhinoceros  ===================
B D                     Horse  ===================

Inserts between block 12 and 13 in window
B D             Green monkey 118bp

Alignment block 13 of 484 in window, 79626154 - 79626155, 2 bps 
B D                     Human  gt
B D                     Chimp  gc
B D                   Gorilla  gt
B D                 Orangutan  gt
B D                    Gibbon  gc
B D                    Rhesus  gt
B D       Crab-eating macaque  gt
B D                    Baboon  gt
B D                  Marmoset  gt
B D           Squirrel monkey  gt
B D                  Bushbaby  gt
B D                  Squirrel  gc
B D           Chinese hamster  gt
               Golden hamster  at
B D                Guinea pig  a-
                   Chinchilla  g-
             Brush-tailed rat  g-
B D                    Rabbit  at
B D                      Pika  gt
B D                  Elephant  gt
B D                   Manatee  gt
             Cape golden mole  gt
                     Aardvark  gt
B D                 Armadillo  gt
             Star-nosed mole  ==
B D                  Hedgehog  ==
B D                     Shrew  ==
B D                  Microbat  ==
B D                    Tenrec  ==
                Prairie vole  ==
B D                       Rat  ==
B D                     Mouse  ==
B D            Naked mole-rat  ==
      Lesser Egyptian jerboa  ==
         Cape elephant shrew  ==
B D                     Sheep  ==
            Tibetan antelope  ==
        David's myotis (bat)  ==
          Chinese tree shrew  ==
               Big brown bat  ==
B D                       Cow  ==
              Pacific walrus  ==
B D                     Panda  ==
               Domestic goat  ==
                Killer whale  ==
              Bactrian camel  ==
B D                    Alpaca  ==
B D                       Pig  ==
B D                       Dog  ==
B D                       Cat  ==
B D                   Ferret   ==
B D                   Dolphin  ==
                Weddell seal  ==
B D                   Megabat  ==
B D                Coelacanth  ==
B D              Green monkey  ==
B D                    Turkey  ==
B D                   Chicken  ==
  D              Mallard duck  ==
          Tibetan ground jay  ==
B D               Zebra finch  ==
  D    White-throated sparrow  ==
B D           Tasmanian devil  ==
B D             X. tropicalis  ==
  D            Painted turtle  ==
B D        American alligator  ==
B D                Budgerigar  ==
B D                   Opossum  ==
  D               Rock pigeon  ==
  D       Collared flycatcher  ==
B D       Medium ground finch  ==
B D                    Lizard  ==
  D          Peregrine falcon  ==
  D              Saker falcon  ==
B D                   Wallaby  ==
  D           Green seaturtle  ==
  D  Chinese softshell turtle  ==
            Black flying-fox  ==
B D          White rhinoceros  ==
B D                     Horse  ==

Inserts between block 13 and 14 in window
B D                   Rhesus 114bp

Alignment block 14 of 484 in window, 79626156 - 79626161, 6 bps 
B D                     Human  gtcagg
B D                     Chimp  gtcagg
B D                   Gorilla  gtcagg
B D                 Orangutan  ttcagg
B D                    Gibbon  gtccgg
B D       Crab-eating macaque  attaat
B D                    Baboon  attaat
B D                  Marmoset  gtcaga
B D           Squirrel monkey  gtcaga
B D                  Bushbaby  gtcaag
B D                  Squirrel  -tcagg
B D           Chinese hamster  atcagg
               Golden hamster  atcagg
B D            Naked mole-rat  gtcagg
B D                Guinea pig  gtaagg
                   Chinchilla  gtcagg
             Brush-tailed rat  atcagg
B D                    Rabbit  gtcaag
B D                      Pika  gtcaag
B D                  Elephant  cccggg
B D                   Manatee  cccggg
             Cape golden mole  aac-ag
                     Aardvark  cctggg
B D                 Armadillo  actggg
             Star-nosed mole  ======
B D                  Hedgehog  ======
B D                     Shrew  ======
B D                  Microbat  ======
B D                    Tenrec  ======
                Prairie vole  ======
B D                       Rat  ======
B D                     Mouse  ======
      Lesser Egyptian jerboa  ======
         Cape elephant shrew  ======
B D                     Sheep  ======
            Tibetan antelope  ======
        David's myotis (bat)  ======
          Chinese tree shrew  ======
               Big brown bat  ======
B D                       Cow  ======
              Pacific walrus  ======
B D                     Panda  ======
               Domestic goat  ======
                Killer whale  ======
              Bactrian camel  ======
B D                    Alpaca  ======
B D                       Pig  ======
B D                       Dog  ======
B D                       Cat  ======
B D                   Ferret   ======
B D                   Dolphin  ======
                Weddell seal  ======
B D                   Megabat  ======
B D                Coelacanth  ======
B D              Green monkey  ======
B D                    Rhesus  ======
B D                    Turkey  ======
B D                   Chicken  ======
  D              Mallard duck  ======
          Tibetan ground jay  ======
B D               Zebra finch  ======
  D    White-throated sparrow  ======
B D           Tasmanian devil  ======
B D             X. tropicalis  ======
  D            Painted turtle  ======
B D        American alligator  ======
B D                Budgerigar  ======
B D                   Opossum  ======
  D               Rock pigeon  ======
  D       Collared flycatcher  ======
B D       Medium ground finch  ======
B D                    Lizard  ======
  D          Peregrine falcon  ======
  D              Saker falcon  ======
B D                   Wallaby  ======
  D           Green seaturtle  ======
  D  Chinese softshell turtle  ======
            Black flying-fox  ======
B D          White rhinoceros  ======
B D                     Horse  ======

Inserts between block 14 and 15 in window
B D      Crab-eating macaque 108bp
B D                   Baboon 109bp

Alignment block 15 of 484 in window, 79626162 - 79626166, 5 bps 
B D                     Human  actgt
B D                     Chimp  actgt
B D                   Gorilla  actgt
B D                 Orangutan  actgt
B D                    Gibbon  actct
B D                    Rhesus  actgt
B D       Crab-eating macaque  actgt
B D                    Baboon  actgt
B D              Green monkey  actgt
B D                  Marmoset  cccct
B D           Squirrel monkey  acctt
B D                  Bushbaby  accct
B D                  Squirrel  actgt
B D           Chinese hamster  gccct
               Golden hamster  gcctt
B D            Naked mole-rat  atccc
B D                Guinea pig  accct
                   Chinchilla  atccc
             Brush-tailed rat  gtcct
B D                    Rabbit  atccc
B D                      Pika  acctg
B D                  Elephant  accct
B D                   Manatee  acccc
             Cape golden mole  accct
                     Aardvark  acact
B D                 Armadillo  atcct
             Star-nosed mole  =====
B D                  Hedgehog  =====
B D                     Shrew  =====
B D                  Microbat  =====
B D                    Tenrec  =====
                Prairie vole  =====
B D                       Rat  =====
B D                     Mouse  =====
      Lesser Egyptian jerboa  =====
         Cape elephant shrew  =====
B D                     Sheep  =====
            Tibetan antelope  =====
        David's myotis (bat)  =====
          Chinese tree shrew  =====
               Big brown bat  =====
B D                       Cow  =====
              Pacific walrus  =====
B D                     Panda  =====
               Domestic goat  =====
                Killer whale  =====
              Bactrian camel  =====
B D                    Alpaca  =====
B D                       Pig  =====
B D                       Dog  =====
B D                       Cat  =====
B D                   Ferret   =====
B D                   Dolphin  =====
                Weddell seal  =====
B D                   Megabat  =====
B D                Coelacanth  =====
B D                    Turkey  =====
B D                   Chicken  =====
  D              Mallard duck  =====
          Tibetan ground jay  =====
B D               Zebra finch  =====
  D    White-throated sparrow  =====
B D           Tasmanian devil  =====
B D             X. tropicalis  =====
  D            Painted turtle  =====
B D        American alligator  =====
B D                Budgerigar  =====
B D                   Opossum  =====
  D               Rock pigeon  =====
  D       Collared flycatcher  =====
B D       Medium ground finch  =====
B D                    Lizard  =====
  D          Peregrine falcon  =====
  D              Saker falcon  =====
B D                   Wallaby  =====
  D           Green seaturtle  =====
  D  Chinese softshell turtle  =====
            Black flying-fox  =====
B D          White rhinoceros  =====
B D                     Horse  =====

Inserts between block 15 and 16 in window
B D                 Squirrel 2104bp

Alignment block 16 of 484 in window, 79626167 - 79626179, 13 bps 
B D                     Human  tagggtcttcaag
B D                     Chimp  tagggtcttcaag
B D                   Gorilla  tagggtcttcaac
B D                 Orangutan  taaggtcttcaag
B D                    Gibbon  tagggtcttcagg
B D                    Rhesus  tagggtcttcaag
B D       Crab-eating macaque  tagggtcttcaag
B D                    Baboon  tagggtcttcaag
B D              Green monkey  tagggtcttcacg
B D                  Marmoset  tagggtcttcaca
B D           Squirrel monkey  tagggtcttcaca
B D                  Bushbaby  taggatacccagg
B D           Chinese hamster  tctggtgctgcag
               Golden hamster  tctgatgctgcag
B D            Naked mole-rat  tagggggttgcag
B D                Guinea pig  tggggagcagcag
                   Chinchilla  cggggagtggcag
             Brush-tailed rat  tggggagtggtag
B D                    Rabbit  tgggtctctgcag
B D                      Pika  taggcttcaacag
B D                  Elephant  tagggtattcaga
B D                   Manatee  tagggaattcaga
             Cape golden mole  cagagtatttagg
                     Aardvark  tagggcattcag-
B D                 Armadillo  t--tgtattctgg
             Star-nosed mole  =============
B D                  Hedgehog  =============
B D                     Shrew  =============
B D                  Microbat  =============
B D                    Tenrec  =============
                Prairie vole  =============
B D                  Squirrel  =============
B D                       Rat  =============
B D                     Mouse  =============
      Lesser Egyptian jerboa  =============
         Cape elephant shrew  =============
B D                     Sheep  =============
            Tibetan antelope  =============
        David's myotis (bat)  =============
          Chinese tree shrew  =============
               Big brown bat  =============
B D                       Cow  =============
              Pacific walrus  =============
B D                     Panda  =============
               Domestic goat  =============
                Killer whale  =============
              Bactrian camel  =============
B D                    Alpaca  =============
B D                       Pig  =============
B D                       Dog  =============
B D                       Cat  =============
B D                   Ferret   =============
B D                   Dolphin  =============
                Weddell seal  =============
B D                   Megabat  =============
B D                Coelacanth  =============
B D                    Turkey  =============
B D                   Chicken  =============
  D              Mallard duck  =============
          Tibetan ground jay  =============
B D               Zebra finch  =============
  D    White-throated sparrow  =============
B D           Tasmanian devil  =============
B D             X. tropicalis  =============
  D            Painted turtle  =============
B D        American alligator  =============
B D                Budgerigar  =============
B D                   Opossum  =============
  D               Rock pigeon  =============
  D       Collared flycatcher  =============
B D       Medium ground finch  =============
B D                    Lizard  =============
  D          Peregrine falcon  =============
  D              Saker falcon  =============
B D                   Wallaby  =============
  D           Green seaturtle  =============
  D  Chinese softshell turtle  =============
            Black flying-fox  =============
B D          White rhinoceros  =============
B D                     Horse  =============

Inserts between block 16 and 17 in window
B D           Naked mole-rat 1bp
B D               Guinea pig 1bp
                  Chinchilla 1bp
            Brush-tailed rat 1bp

Alignment block 17 of 484 in window, 79626180 - 79626218, 39 bps 
B D                     Human  gg-cccccaaatgaactgatatcatgcacaca-ctcctac-t
B D                     Chimp  gg-cccccaaatgaactgatatcatgcacata-ctcctac-t
B D                   Gorilla  gg-cccccaaatgaactgatatcacgcacaca-ctcctac-t
B D                 Orangutan  gg-cccccaaatgaactgatatcatgcacata-ctcctac-t
B D                    Gibbon  gg-cccccagatgaacagatatcatgcacaca-cgcctac-t
B D                    Rhesus  tg-cccccaaatgaactgatatcatgcacaca-cacctac-t
B D       Crab-eating macaque  tg-cccccaaatgaactgatatcatgcacaca-cacctac-t
B D                    Baboon  gg-cccccagatgaactgatatcatgcacaca-cacctac-t
B D              Green monkey  gg-cccccagatgaactgatatcatgcacaca-catctac-t
B D                  Marmoset  gg-cccccaaatgaaacgatgtcttgtacaaa-ctcctac-t
B D           Squirrel monkey  ggccccccaaatgaagtggtatctcgtaccca-ttcctac-t
B D                  Bushbaby  gg-aacacaaatggatctatggcatgcacaca-ttcctac-c
                 Prairie vole  gg-accaaaaaccaaatgaaaccatgcacatg-ttcatac-t
B D           Chinese hamster  gg-actaagagccaattggaattgtgcacaca-ttcatat-t
               Golden hamster  ga-actaagaaccaattagaatcgtgcaaaca-tttatat-t
B D            Naked mole-rat  gg-accaggagggagctgcgattgtgcacaca-tttctgc-t
B D                Guinea pig  gg-accccaaggcagctttggtcatgcacacg-tttctgc-t
                   Chinchilla  gg-acc-tgagggagcttcaatcatgtacaca-tttctgc-t
             Brush-tailed rat  gg-accatgagagagctttgattaagtataca-tttctgc-t
B D                    Rabbit  ga-accaggaatgagctgacctcatgcacaca-ttcctat-t
B D                      Pika  gg-gccaagaatgaactaataacagg--cagt-ttcctgt-t
B D                  Elephant  gg-accatggttgaattgatgacacatacaca-ttttttt--
B D                   Manatee  gg-accatgactgaactgatgatacacacacgtttttttt--
             Cape golden mole  ga-gccgtgactgaaatcttgtcacatgtacc-ttttttt--
                     Aardvark  gg-gccatgactgaactgatggcacacagaca-ttttttt--
B D                 Armadillo  ag-accatggatgaacagatagcatgtagacc-ttgctact-
             Star-nosed mole  ==========================================
B D                  Hedgehog  ==========================================
B D                     Shrew  ==========================================
B D                  Microbat  ==========================================
B D                    Tenrec  ==========================================
B D                  Squirrel  ==========================================
B D                       Rat  ==========================================
B D                     Mouse  ==========================================
      Lesser Egyptian jerboa  ==========================================
         Cape elephant shrew  ==========================================
B D                     Sheep  ==========================================
            Tibetan antelope  ==========================================
        David's myotis (bat)  ==========================================
          Chinese tree shrew  ==========================================
               Big brown bat  ==========================================
B D                       Cow  ==========================================
              Pacific walrus  ==========================================
B D                     Panda  ==========================================
               Domestic goat  ==========================================
                Killer whale  ==========================================
              Bactrian camel  ==========================================
B D                    Alpaca  ==========================================
B D                       Pig  ==========================================
B D                       Dog  ==========================================
B D                       Cat  ==========================================
B D                   Ferret   ==========================================
B D                   Dolphin  ==========================================
                Weddell seal  ==========================================
B D                   Megabat  ==========================================
B D                Coelacanth  ==========================================
B D                    Turkey  ==========================================
B D                   Chicken  ==========================================
  D              Mallard duck  ==========================================
          Tibetan ground jay  ==========================================
B D               Zebra finch  ==========================================
  D    White-throated sparrow  ==========================================
B D           Tasmanian devil  ==========================================
B D             X. tropicalis  ==========================================
  D            Painted turtle  ==========================================
B D        American alligator  ==========================================
B D                Budgerigar  ==========================================
B D                   Opossum  ==========================================
  D               Rock pigeon  ==========================================
  D       Collared flycatcher  ==========================================
B D       Medium ground finch  ==========================================
B D                    Lizard  ==========================================
  D          Peregrine falcon  ==========================================
  D              Saker falcon  ==========================================
B D                   Wallaby  ==========================================
  D           Green seaturtle  ==========================================
  D  Chinese softshell turtle  ==========================================
            Black flying-fox  ==========================================
B D          White rhinoceros  ==========================================
B D                     Horse  ==========================================

Inserts between block 17 and 18 in window
B D                 Elephant 2bp
B D                  Manatee 2bp
            Cape golden mole 7bp
                    Aardvark 2bp

Alignment block 18 of 484 in window, 79626219 - 79626327, 109 bps 
B D                     Human  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaaaaatt--tt--ctcac-
B D                     Chimp  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaaaaatt--tt--ctcac-
B D                   Gorilla  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaagaatt--tt--ctcac-
B D                 Orangutan  gcaagggtctcatgaactccctcaaactatcaaagacatccatgactcaagaaaaatt--tt--ctcac-
B D                    Gibbon  gcaagggtctcatgaactccctcaaactctcaaagaaatccatgactcaagaaaaatt--tt--ctcac-
B D                    Rhesus  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaaaaatg--tt--ctcac-
B D       Crab-eating macaque  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaaaaatg--tt--ctcac-
B D                    Baboon  gcaagggtctcatgaactccctcaaactctcaaagtcatccatgactcaagaaaaatg--tt--ctcac-
B D              Green monkey  gcaagggtctcatcaactccctcaaactctcaaagtcatccatgactcaagaaaaatt--tt--ctcac-
B D                  Marmoset  gcaaaggtctcataaactccctcaaactctcaaaatcatccatgactcaagaaaaatt--tt--cttac-
B D           Squirrel monkey  gcaaaggtctcacaaactccctcaaactctcgaagtcatccatgactcaagaaaaatt--tt--cttac-
B D                  Bushbaby  acaagggtctcacggacttcttcaaattctcaaaggcatccatggctcaagaaaaatggaga--catat-
                 Prairie vole  gtgagggtcacaagaaagtctttactttctccaagccatttatagtccaagaaaaccc--cagaaccac-
B D           Chinese hamster  gtgaaagttatagaaaagtctctggattctccaaatcatccatagcccaagaaaactc--cagaaccac-
               Golden hamster  gtgaaggttacagaaaagtctttggattctccatgtcatctatagctcaagaaaactc--cagaaccat-
B D            Naked mole-rat  g-------------aacttccctgaattctcaaaggcattcagggcacaaggaatatc--cagaaccac-
B D                Guinea pig  g-------------agatcgcctgaattcccaaaggtatccatggcccaaggaatatt--cagaaccac-
                   Chinchilla  g-------------caattgccttaattctcaaaggcatccatggcccaaggaatatt--cagaatcgc-
             Brush-tailed rat  g-------------aacttgcctgagttctcaaaggcatccatggctgcaggcatatt--ccaaatcac-
B D                    Rabbit  gggagggtctcatgaaacccctcagattcactatggcacccatggttcaagcaaaatg--tagaaccac-
B D                      Pika  ggaagg-------------tctctgagtcacaatggcacttatggttcaagaaaaatc--tagaccgact
B D                  Elephant  gtgagggtgccatgtgcttctttgaattctcagaggcattcatggctcaat-aaaatt--tagaactgc-
B D                   Manatee  gtgacggtgctgtgcacttccgcgaattctgagaggcattcatggctcaat-aaaatt--tagaaccac-
             Cape golden mole  ttgagagtgccatatgcttccttgaattctcagaggtacccacgactcagt-aaactt--taaaacca--
B D                    Tenrec  gtgagggttacatgtactttcctgaggtctctgagaca-ttatggcccgat-aaagtc--cagaagcgt-
                     Aardvark  gtgcggatactatgcgctttctcaaattctcagaggtatccaagtctcaat-aaaatt--tagaactgc-
B D                 Armadillo  -cgagggtgttgaattcttcatcaaattctcagaggcatctatggctcaagaaaaatt--ctgaagcac-
             Star-nosed mole  ======================================================================
B D                  Hedgehog  ======================================================================
B D                     Shrew  ======================================================================
B D                  Microbat  ======================================================================
B D                  Squirrel  ======================================================================
B D                       Rat  ======================================================================
B D                     Mouse  ======================================================================
      Lesser Egyptian jerboa  ======================================================================
         Cape elephant shrew  ======================================================================
B D                     Sheep  ======================================================================
            Tibetan antelope  ======================================================================
        David's myotis (bat)  ======================================================================
          Chinese tree shrew  ======================================================================
               Big brown bat  ======================================================================
B D                       Cow  ======================================================================
              Pacific walrus  ======================================================================
B D                     Panda  ======================================================================
               Domestic goat  ======================================================================
                Killer whale  ======================================================================
              Bactrian camel  ======================================================================
B D                    Alpaca  ======================================================================
B D                       Pig  ======================================================================
B D                       Dog  ======================================================================
B D                       Cat  ======================================================================
B D                   Ferret   ======================================================================
B D                   Dolphin  ======================================================================
                Weddell seal  ======================================================================
B D                   Megabat  ======================================================================
B D                Coelacanth  ======================================================================
B D                    Turkey  ======================================================================
B D                   Chicken  ======================================================================
  D              Mallard duck  ======================================================================
          Tibetan ground jay  ======================================================================
B D               Zebra finch  ======================================================================
  D    White-throated sparrow  ======================================================================
B D           Tasmanian devil  ======================================================================
B D             X. tropicalis  ======================================================================
  D            Painted turtle  ======================================================================
B D        American alligator  ======================================================================
B D                Budgerigar  ======================================================================
B D                   Opossum  ======================================================================
  D               Rock pigeon  ======================================================================
  D       Collared flycatcher  ======================================================================
B D       Medium ground finch  ======================================================================
B D                    Lizard  ======================================================================
  D          Peregrine falcon  ======================================================================
  D              Saker falcon  ======================================================================
B D                   Wallaby  ======================================================================
  D           Green seaturtle  ======================================================================
  D  Chinese softshell turtle  ======================================================================
            Black flying-fox  ======================================================================
B D          White rhinoceros  ======================================================================
B D                     Horse  ======================================================================

                        Human  --tgat-gtaaaaag-aaggc-aggagaagaaatgcgtc--tgggc-catac
                        Chimp  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catac
                      Gorilla  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
                    Orangutan  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
                       Gibbon  --tgat-ataaaaag-aaggc-aggaaaagaaatgcacc--tgggc-catag
                       Rhesus  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
          Crab-eating macaque  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
                       Baboon  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
                 Green monkey  --tgat-gtaaaaag-aaggc-aggagaagaaatgcatc--tgggc-catag
                     Marmoset  --tgat-gtaaaaca-aaggc-aggagaagaaatgcatc--tgggc-cacag
              Squirrel monkey  --tgat-gtaaaaca-aaggc-aggagaagaaatgcatc--tgggc-cacag
                     Bushbaby  --taat-gtaaagag-aagtc-agaggaggaatcgcatccgtgggt-aagca
                 Prairie vole  --tgat-------gg-aaatc-agggaaag---------------------a
              Chinese hamster  --tgat-------gg-aaatcaagggaaag---------------------a
               Golden hamster  --taat-------gg-aaatc-aggggaag---------------------a
               Naked mole-rat  --tggttgtagagag-aaatc----agaag-------tctggggct-cataa
                   Guinea pig  --tgattctaaagag-aaatt-ggaagaag-------tctgtggct-aatgg
                   Chinchilla  --tgattctatagag-aaatc-aggagaag-------tctgcagtt-aataa
             Brush-tailed rat  --tgattctagagagtaattc-gggagagg-------tctgtggct-aatga
                       Rabbit  --caat-acaaagac-aggtc-agaagaaga--ttcatctgtaggc-agcaa
                         Pika  gatgat-acacaggg-aagtg-agaaggagag-tttgtctgtaggc-agcaa
                     Elephant  --tgtt-ctaaaggg-aagtc-agaagaaaaaattagtctgtgggt-aa---
                      Manatee  --tgtt-ctaaaggg-aagtc-agaagaagaaataagtctgtgggt-a----
             Cape golden mole  --cctt-ccaaaggg-aagtc-agaagaagaaattaaactgaggat-aa---
                       Tenrec  --cttt-ctaaagag-cagtc-aagagaggaaatccatccatggatcaa---
                     Aardvark  --tgct-ctatacag-aagtt-agaagaagaaattagtttgtggat-ac---
                    Armadillo  --tgat-ctaaaggg-aggtc-agaagtagaaatttgtccatgggt-aa---
              Star-nosed mole  ====================================================
                     Hedgehog  ====================================================
                        Shrew  ====================================================
                     Microbat  ====================================================
                     Squirrel  ====================================================
                          Rat  ====================================================
                        Mouse  ====================================================
       Lesser Egyptian jerboa  ====================================================
          Cape elephant shrew  ====================================================
                        Sheep  ====================================================
             Tibetan antelope  ====================================================
         David's myotis (bat)  ====================================================
           Chinese tree shrew  ====================================================
                Big brown bat  ====================================================
                          Cow  ====================================================
               Pacific walrus  ====================================================
                        Panda  ====================================================
                Domestic goat  ====================================================
                 Killer whale  ====================================================
               Bactrian camel  ====================================================
                       Alpaca  ====================================================
                          Pig  ====================================================
                          Dog  ====================================================
                          Cat  ====================================================
                      Ferret   ====================================================
                      Dolphin  ====================================================
                 Weddell seal  ====================================================
                      Megabat  ====================================================
                   Coelacanth  ====================================================
                       Turkey  ====================================================
                      Chicken  ====================================================
                 Mallard duck  ====================================================
           Tibetan ground jay  ====================================================
                  Zebra finch  ====================================================
       White-throated sparrow  ====================================================
              Tasmanian devil  ====================================================
                X. tropicalis  ====================================================
               Painted turtle  ====================================================
           American alligator  ====================================================
                   Budgerigar  ====================================================
                      Opossum  ====================================================
                  Rock pigeon  ====================================================
          Collared flycatcher  ====================================================
          Medium ground finch  ====================================================
                       Lizard  ====================================================
             Peregrine falcon  ====================================================
                 Saker falcon  ====================================================
                      Wallaby  ====================================================
              Green seaturtle  ====================================================
     Chinese softshell turtle  ====================================================
             Black flying-fox  ====================================================
             White rhinoceros  ====================================================
                        Horse  ====================================================

Inserts between block 18 and 19 in window
B D                 Elephant 2bp
            Cape golden mole 1bp
B D                   Tenrec 1bp
B D                Armadillo 3bp

Alignment block 19 of 484 in window, 79626328 - 79626361, 34 bps 
B D                     Human  agg-----agagt-tctgttaaggtgacagtgcctgctgt
B D                     Chimp  agg-----agagt-tctgttaaggtgacagtgcctgctgt
B D                   Gorilla  agg-----agagt-tctgttaaggtgacagtgcctgctgt
B D                 Orangutan  agg-----agagt-tctgttaaggtgacagtgcctgctgt
B D                    Gibbon  agg-----agagt-tctgttaaggtgacagtgcctgctgt
B D                    Rhesus  acg-----agagt-tctgttatggtgacagtgcctgctgt
B D       Crab-eating macaque  acg-----agagt-tctgttatggtgacagtgcctgctgt
B D                    Baboon  agg-----agagt-tctgttatggtgacagtgcctgctgt
B D              Green monkey  agg-----agagt-tctgttatggtgacagtgcctgctgt
B D                  Marmoset  agg-----agagt-tctgttatggtgacagtgcctgctgt
B D           Squirrel monkey  agg-----agtgt-tctgttatggtgacagtgcctgctgt
B D                  Bushbaby  agg-----agagc-tctgttacagtgacagcacctgctat
                 Prairie vole  agg-----ttaat-tgtac------ataggaaatggctgg
B D           Chinese hamster  aag-----ttagc-tgtag------ctaggaaatggctag
               Golden hamster  aag-----ttagc-tatag------ctaggaagtggctag
B D            Naked mole-rat  agg-----acagt-ttaat------ttcagtgcctgctaa
B D                Guinea pig  aga-----tcagt-ttggt-------tctgtacatgctgg
                   Chinchilla  agg-----tcagc-ttggt------gcctgtgactgctag
             Brush-tailed rat  aga-----tcagc-tctgt------gcctgtgcacactgg
B D                    Rabbit  aggagaacccacc-acagt------gacagtgcctgctgc
B D                      Pika  agggggttctgac-acagt------ggtagtgcctgtcgc
B D                  Elephant  agg-----actgt-tttgttgcgct----gttactggcat
          Cape elephant shrew  agg-----agggt-tttactacagtgagaggtgctggctt
B D                   Manatee  aaa-----agtgt-tttgttacagtgactcttactggtgt
             Cape golden mole  agg-----gatgt-tttgtttcagagactagtattggtga
B D                    Tenrec  agg-----catga-tgcgtcccagagcctgcggctggtgt
                     Aardvark  aac-----agtgtgtttgttatagggactgttagtggcct
B D                 Armadillo  agg-----cataa-tctgtcccagt-tccatttctgatgc
             Star-nosed mole  ========================================
B D                  Hedgehog  ========================================
B D                     Shrew  ========================================
B D                  Microbat  ========================================
B D                  Squirrel  ========================================
B D                       Rat  ========================================
B D                     Mouse  ========================================
      Lesser Egyptian jerboa  ========================================
B D                     Sheep  ========================================
            Tibetan antelope  ========================================
        David's myotis (bat)  ========================================
          Chinese tree shrew  ========================================
               Big brown bat  ========================================
B D                       Cow  ========================================
              Pacific walrus  ========================================
B D                     Panda  ========================================
               Domestic goat  ========================================
                Killer whale  ========================================
              Bactrian camel  ========================================
B D                    Alpaca  ========================================
B D                       Pig  ========================================
B D                       Dog  ========================================
B D                       Cat  ========================================
B D                   Ferret   ========================================
B D                   Dolphin  ========================================
                Weddell seal  ========================================
B D                   Megabat  ========================================
B D                Coelacanth  ========================================
B D                    Turkey  ========================================
B D                   Chicken  ========================================
  D              Mallard duck  ========================================
          Tibetan ground jay  ========================================
B D               Zebra finch  ========================================
  D    White-throated sparrow  ========================================
B D           Tasmanian devil  ========================================
B D             X. tropicalis  ========================================
  D            Painted turtle  ========================================
B D        American alligator  ========================================
B D                Budgerigar  ========================================
B D                   Opossum  ========================================
  D               Rock pigeon  ========================================
  D       Collared flycatcher  ========================================
B D       Medium ground finch  ========================================
B D                    Lizard  ========================================
  D          Peregrine falcon  ========================================
  D              Saker falcon  ========================================
B D                   Wallaby  ========================================
  D           Green seaturtle  ========================================
  D  Chinese softshell turtle  ========================================
            Black flying-fox  ========================================
B D          White rhinoceros  ========================================
B D                     Horse  ========================================

Inserts between block 19 and 20 in window
B D                  Manatee 535bp

Alignment block 20 of 484 in window, 79626362 - 79626372, 11 bps 
B D                     Human  cacctc--cttaa
B D                     Chimp  cacctc--cttaa
B D                   Gorilla  cacctc--cttaa
B D                 Orangutan  catctc--cttaa
B D                    Gibbon  catctc--cttaa
B D                    Rhesus  cacctc--cataa
B D       Crab-eating macaque  cacctc--cataa
B D                    Baboon  cacctc--cataa
B D              Green monkey  cacctc--cataa
B D                  Marmoset  cccctc--cataa
B D           Squirrel monkey  cccctc--cataa
B D                  Bushbaby  agccct--cgc--
                 Prairie vole  agccct--cct--
B D           Chinese hamster  agccct--ctt--
               Golden hamster  agacct--ctt--
B D            Naked mole-rat  gacttc--act--
B D                Guinea pig  aaggtc--aca--
                   Chinchilla  aacctc--aca--
             Brush-tailed rat  aacctc--aca--
B D                    Rabbit  agcccccacac--
B D                      Pika  agccct--cag--
B D                  Elephant  agttct--gat--
          Cape elephant shrew  tcttct--tcc--
             Cape golden mole  catttt--gat--
B D                    Tenrec  tgctct--g-t--
                     Aardvark  agttct--gat--
B D                 Armadillo  ----c--------
             Star-nosed mole  =============
B D                  Hedgehog  =============
B D                     Shrew  =============
B D                  Microbat  =============
B D                  Squirrel  =============
B D                       Rat  =============
B D                     Mouse  =============
      Lesser Egyptian jerboa  =============
B D                     Sheep  =============
            Tibetan antelope  =============
        David's myotis (bat)  =============
          Chinese tree shrew  =============
               Big brown bat  =============
B D                       Cow  =============
              Pacific walrus  =============
B D                     Panda  =============
               Domestic goat  =============
                Killer whale  =============
              Bactrian camel  =============
B D                    Alpaca  =============
B D                       Pig  =============
B D                       Dog  =============
B D                       Cat  =============
B D                   Ferret   =============
B D                   Dolphin  =============
                Weddell seal  =============
B D                   Megabat  =============
B D                Coelacanth  =============
B D                    Turkey  =============
B D                   Chicken  =============
  D              Mallard duck  =============
          Tibetan ground jay  =============
B D               Zebra finch  =============
  D    White-throated sparrow  =============
B D           Tasmanian devil  =============
B D             X. tropicalis  =============
  D            Painted turtle  =============
B D        American alligator  =============
B D                Budgerigar  =============
B D                   Opossum  =============
  D               Rock pigeon  =============
  D       Collared flycatcher  =============
B D       Medium ground finch  =============
B D                    Lizard  =============
  D          Peregrine falcon  =============
  D              Saker falcon  =============
B D                   Wallaby  =============
B D                   Manatee  =============
  D           Green seaturtle  =============
  D  Chinese softshell turtle  =============
            Black flying-fox  =============
B D          White rhinoceros  =============
B D                     Horse  =============

Inserts between block 20 and 21 in window
B D                 Elephant 2bp
         Cape elephant shrew 1bp
            Cape golden mole 2bp
B D                   Tenrec 2bp
                    Aardvark 2bp

Alignment block 21 of 484 in window, 79626373 - 79626398, 26 bps 
B D                     Human  ctcacaaggcac----ctggtca---gctaagt
B D                     Chimp  ctcacaaggcac----ctggtca---gctaagt
B D                   Gorilla  ctcacaaggcac----ctggtca---gctaagt
B D                 Orangutan  ctcacaaggcac----ctggtca---gctaagt
B D                    Gibbon  ctcacaaagcac----ctggtca---gttaagt
B D                    Rhesus  ctcacaaggcac----ctggtca---gctaagt
B D       Crab-eating macaque  ctcacaaggcac----ctggtca---gctaagt
B D                    Baboon  ctcacaaggcac----ctggtca---gctaagt
B D              Green monkey  ctcacaaggcac----ctggtca---gctaagt
B D                  Marmoset  ctcacaaggcac----ccagtca---gctaagt
B D           Squirrel monkey  ctcacaaggcac----ctggtca---gctaggt
B D                  Bushbaby  cctgcaaggcac----tctgtta---gccaagt
                 Prairie vole  gctctaaggctg----tcttgta---gcaaaca
B D           Chinese hamster  -ctctaaggctg----tcttaca---gagatga
               Golden hamster  gctcaaaggctg----tcttaca---gtgaaga
B D            Naked mole-rat  cctgcaaggtgg----cctgcta---g-aaagt
B D                Guinea pig  cctggaagg-gg----cctgtta---gcaacgt
                   Chinchilla  actgcaaggtgg----cctgtta---gtaaagt
             Brush-tailed rat  tctgcaaggtga----cctgtta---gcaaaat
B D                    Rabbit  cccacagggtac----ctcctcctcagcaaagc
B D                      Pika  cttgcagggcac----ctccact---gccaagc
B D                  Elephant  cctgcaaggcaaccaaccagtca---gtcaagt
          Cape elephant shrew  tctacaaggtaact--ccg--ca---gtcaagt
B D                   Manatee  cctgcaaggcaa----ccagtca---gtcaagt
             Cape golden mole  cctgcaaggcag----ctggtga---ttcaagg
B D                    Tenrec  caggcagggtga----ccagtga---gttaagc
                     Aardvark  cctgcaaggcaa----ccagtta---gtccagt
B D                 Armadillo  -ctgcaaggcac----ctagtta---gcaaagt
             Star-nosed mole  =================================
B D                  Hedgehog  =================================
B D                     Shrew  =================================
B D                  Microbat  =================================
B D                  Squirrel  =================================
B D                       Rat  =================================
B D                     Mouse  =================================
      Lesser Egyptian jerboa  =================================
B D                     Sheep  =================================
            Tibetan antelope  =================================
        David's myotis (bat)  =================================
          Chinese tree shrew  =================================
               Big brown bat  =================================
B D                       Cow  =================================
              Pacific walrus  =================================
B D                     Panda  =================================
               Domestic goat  =================================
                Killer whale  =================================
              Bactrian camel  =================================
B D                    Alpaca  =================================
B D                       Pig  =================================
B D                       Dog  =================================
B D                       Cat  =================================
B D                   Ferret   =================================
B D                   Dolphin  =================================
                Weddell seal  =================================
B D                   Megabat  =================================
B D                Coelacanth  =================================
B D                    Turkey  =================================
B D                   Chicken  =================================
  D              Mallard duck  =================================
          Tibetan ground jay  =================================
B D               Zebra finch  =================================
  D    White-throated sparrow  =================================
B D           Tasmanian devil  =================================
B D             X. tropicalis  =================================
  D            Painted turtle  =================================
B D        American alligator  =================================
B D                Budgerigar  =================================
B D                   Opossum  =================================
  D               Rock pigeon  =================================
  D       Collared flycatcher  =================================
B D       Medium ground finch  =================================
B D                    Lizard  =================================
  D          Peregrine falcon  =================================
  D              Saker falcon  =================================
B D                   Wallaby  =================================
  D           Green seaturtle  =================================
  D  Chinese softshell turtle  =================================
            Black flying-fox  =================================
B D          White rhinoceros  =================================
B D                     Horse  =================================

Alignment block 22 of 484 in window, 79626399 - 79626411, 13 bps 
B D                     Human  tcta--tgatctgtt
B D                     Chimp  tcta--tgatctgtt
B D                   Gorilla  tcta--tgatctgtt
B D                 Orangutan  tcta--tgatctgtt
B D                    Gibbon  tcta--tgatctgtt
B D                    Rhesus  tcta--tgatctgtt
B D       Crab-eating macaque  tcta--tgatctgtt
B D                    Baboon  tcta--tgatctgtt
B D              Green monkey  gcta--tgatctgtt
B D                  Marmoset  tctg--tgatatctt
B D           Squirrel monkey  tcta--tgatctctt
B D                  Bushbaby  tcaa--gggtcaact
           Chinese tree shrew  tgta--tgtatagtt
                 Prairie vole  tggg--tgcttagtt
B D           Chinese hamster  tggg--tgcttagtt
               Golden hamster  tggg--tgcttagtt
B D            Naked mole-rat  tcca--caatcgg--
B D                Guinea pig  tgca--cacccag-t
                   Chinchilla  accg--cagtcag-c
             Brush-tailed rat  acca--cagtcaa-t
B D                    Rabbit  tcag--cagctggct
B D                      Pika  tcag--cagccggct
B D                  Elephant  ccag--tggtccctt
          Cape elephant shrew  ccag--tagtcactg
B D                   Manatee  ctag--tggtcacct
             Cape golden mole  ctag--ggaccactt
B D                    Tenrec  ccagtagtgactctt
                     Aardvark  ccag--tggccactt
B D                 Armadillo  ccag--tgatcagtt
             Star-nosed mole  ===============
B D                  Hedgehog  ===============
B D                     Shrew  ===============
B D                  Microbat  ===============
B D                  Squirrel  ===============
B D                       Rat  ===============
B D                     Mouse  ===============
      Lesser Egyptian jerboa  ===============
B D                     Sheep  ===============
            Tibetan antelope  ===============
        David's myotis (bat)  ===============
               Big brown bat  ===============
B D                       Cow  ===============
              Pacific walrus  ===============
B D                     Panda  ===============
               Domestic goat  ===============
                Killer whale  ===============
              Bactrian camel  ===============
B D                    Alpaca  ===============
B D                       Pig  ===============
B D                       Dog  ===============
B D                       Cat  ===============
B D                   Ferret   ===============
B D                   Dolphin  ===============
                Weddell seal  ===============
B D                   Megabat  ===============
B D                Coelacanth  ===============
B D                    Turkey  ===============
B D                   Chicken  ===============
  D              Mallard duck  ===============
          Tibetan ground jay  ===============
B D               Zebra finch  ===============
  D    White-throated sparrow  ===============
B D           Tasmanian devil  ===============
B D             X. tropicalis  ===============
  D            Painted turtle  ===============
B D        American alligator  ===============
B D                Budgerigar  ===============
B D                   Opossum  ===============
  D               Rock pigeon  ===============
  D       Collared flycatcher  ===============
B D       Medium ground finch  ===============
B D                    Lizard  ===============
  D          Peregrine falcon  ===============
  D              Saker falcon  ===============
B D                   Wallaby  ===============
  D           Green seaturtle  ===============
  D  Chinese softshell turtle  ===============
            Black flying-fox  ===============
B D          White rhinoceros  ===============
B D                     Horse  ===============

Alignment block 23 of 484 in window, 79626412 - 79626426, 15 bps 
B D                     Human  gggaatgcaggacta
B D                     Chimp  gggaatgcaggacta
B D                   Gorilla  gggaatgcaggacta
B D                 Orangutan  gggaatgcaggacta
B D                    Gibbon  gggaatgcaggacta
B D                    Rhesus  gggaatgcaggacta
B D       Crab-eating macaque  gggaatgcaggacta
B D                    Baboon  gggaatgcaggacta
B D              Green monkey  gggaaagcaggacta
B D                  Marmoset  gggaatgcaggacta
B D           Squirrel monkey  gggaatgcaggacta
B D                  Bushbaby  ggcaatgcagggctg
           Chinese tree shrew  ggaaagggaggactg
                 Prairie vole  ggaagtgctgggata
B D           Chinese hamster  gggaacactgtgcta
               Golden hamster  gggagcactgtgcta
B D            Naked mole-rat  -------------tg
B D                Guinea pig  ggaaatgtggggctg
                   Chinchilla  aaaattgtggggctg
             Brush-tailed rat  ggaaatgtgggactg
B D                    Rabbit  ggcatctcagaaacc
B D                      Pika  gggaatgcagaaacc
B D                       Pig  gggcttgcgggccca
B D                  Elephant  ggaaatgcaagacta
          Cape elephant shrew  gtcacttggag----
B D                   Manatee  ggaaatgcaggacta
             Cape golden mole  ggaaatgtggggcta
B D                    Tenrec  ggcagtgcaggacca
                     Aardvark  ggaaatacaggagta
B D                 Armadillo  gaaaatacatgactg
             Star-nosed mole  ===============
B D                  Hedgehog  ===============
B D                     Shrew  ===============
B D                  Microbat  ===============
B D                  Squirrel  ===============
B D                       Rat  ===============
B D                     Mouse  ===============
      Lesser Egyptian jerboa  ===============
B D                     Sheep  ===============
            Tibetan antelope  ===============
        David's myotis (bat)  ===============
               Big brown bat  ===============
B D                       Cow  ===============
              Pacific walrus  ===============
B D                     Panda  ===============
               Domestic goat  ===============
                Killer whale  ===============
              Bactrian camel  ===============
B D                    Alpaca  ===============
B D                       Dog  ===============
B D                       Cat  ===============
B D                   Ferret   ===============
B D                   Dolphin  ===============
                Weddell seal  ===============
B D                   Megabat  ===============
B D                Coelacanth  ===============
B D                    Turkey  ===============
B D                   Chicken  ===============
  D              Mallard duck  ===============
          Tibetan ground jay  ===============
B D               Zebra finch  ===============
  D    White-throated sparrow  ===============
B D           Tasmanian devil  ===============
B D             X. tropicalis  ===============
  D            Painted turtle  ===============
B D        American alligator  ===============
B D                Budgerigar  ===============
B D                   Opossum  ===============
  D               Rock pigeon  ===============
  D       Collared flycatcher  ===============
B D       Medium ground finch  ===============
B D                    Lizard  ===============
  D          Peregrine falcon  ===============
  D              Saker falcon  ===============
B D                   Wallaby  ===============
  D           Green seaturtle  ===============
  D  Chinese softshell turtle  ===============
            Black flying-fox  ===============
B D          White rhinoceros  ===============
B D                     Horse  ===============

Alignment block 24 of 484 in window, 79626427 - 79626431, 5 bps 
B D                     Human  gagtt
B D                     Chimp  gagtt
B D                   Gorilla  gagtt
B D                 Orangutan  gagtt
B D                    Gibbon  gagtt
B D                    Rhesus  gagtt
B D       Crab-eating macaque  gagtt
B D                    Baboon  gagtt
B D              Green monkey  gagtt
B D                  Marmoset  gattt
B D           Squirrel monkey  gattt
B D                  Bushbaby  gagtt
           Chinese tree shrew  aagt-
                 Prairie vole  gaatc
B D           Chinese hamster  gaatc
               Golden hamster  gaatc
B D            Naked mole-rat  gagtt
B D                Guinea pig  gagtt
                   Chinchilla  gagtt
             Brush-tailed rat  gagtt
B D                    Rabbit  cagtt
B D                      Pika  aactt
B D                       Pig  gag--
B D                     Horse  gagcc
B D                  Elephant  gagtt
          Cape elephant shrew  --gtg
B D                   Manatee  gagtt
             Cape golden mole  gggtt
B D                    Tenrec  -agtt
                     Aardvark  gagtt
B D                 Armadillo  gagtt
             Star-nosed mole  =====
B D                  Hedgehog  =====
B D                     Shrew  =====
B D                  Microbat  =====
B D                  Squirrel  =====
B D                       Rat  =====
B D                     Mouse  =====
      Lesser Egyptian jerboa  =====
B D                     Sheep  =====
            Tibetan antelope  =====
        David's myotis (bat)  =====
               Big brown bat  =====
B D                       Cow  =====
              Pacific walrus  =====
B D                     Panda  =====
               Domestic goat  =====
                Killer whale  =====
              Bactrian camel  =====
B D                    Alpaca  =====
B D                       Dog  =====
B D                       Cat  =====
B D                   Ferret   =====
B D                   Dolphin  =====
                Weddell seal  =====
B D                   Megabat  =====
B D                Coelacanth  =====
B D                    Turkey  =====
B D                   Chicken  =====
  D              Mallard duck  =====
          Tibetan ground jay  =====
B D               Zebra finch  =====
  D    White-throated sparrow  =====
B D           Tasmanian devil  =====
B D             X. tropicalis  =====
  D            Painted turtle  =====
B D        American alligator  =====
B D                Budgerigar  =====
B D                   Opossum  =====
  D               Rock pigeon  =====
  D       Collared flycatcher  =====
B D       Medium ground finch  =====
B D                    Lizard  =====
  D          Peregrine falcon  =====
  D              Saker falcon  =====
B D                   Wallaby  =====
  D           Green seaturtle  =====
  D  Chinese softshell turtle  =====
            Black flying-fox  =====
B D          White rhinoceros  =====

Alignment block 25 of 484 in window, 79626432 - 79626433, 2 bps 
B D                     Human  cc
B D                     Chimp  cc
B D                   Gorilla  cc
B D                 Orangutan  cc
B D                    Gibbon  cc
B D                    Rhesus  cc
B D       Crab-eating macaque  cc
B D                    Baboon  cc
B D              Green monkey  cc
B D                  Marmoset  cg
B D           Squirrel monkey  tg
B D                  Bushbaby  ca
                 Prairie vole  ca
B D           Chinese hamster  cc
               Golden hamster  cc
B D            Naked mole-rat  ca
B D                Guinea pig  cg
                   Chinchilla  cg
             Brush-tailed rat  tg
B D                    Rabbit  cg
B D                      Pika  ca
B D                     Horse  c-
B D                       Dog  c-
B D                  Elephant  ca
          Cape elephant shrew  ca
B D                   Manatee  ca
             Cape golden mole  cc
B D                    Tenrec  ct
                     Aardvark  ca
B D                 Armadillo  cc
             Star-nosed mole  ==
B D                  Hedgehog  ==
B D                     Shrew  ==
B D                  Microbat  ==
B D                  Squirrel  ==
B D                       Rat  ==
B D                     Mouse  ==
      Lesser Egyptian jerboa  ==
B D                     Sheep  ==
            Tibetan antelope  ==
        David's myotis (bat)  ==
          Chinese tree shrew  --
               Big brown bat  ==
B D                       Cow  ==
              Pacific walrus  ==
B D                     Panda  ==
               Domestic goat  ==
                Killer whale  ==
              Bactrian camel  ==
B D                    Alpaca  ==
B D                       Pig  --
B D                       Cat  ==
B D                   Ferret   ==
B D                   Dolphin  ==
                Weddell seal  ==
B D                   Megabat  ==
B D                Coelacanth  ==
B D                    Turkey  ==
B D                   Chicken  ==
  D              Mallard duck  ==
          Tibetan ground jay  ==
B D               Zebra finch  ==
  D    White-throated sparrow  ==
B D           Tasmanian devil  ==
B D             X. tropicalis  ==
  D            Painted turtle  ==
B D        American alligator  ==
B D                Budgerigar  ==
B D                   Opossum  ==
  D               Rock pigeon  ==
  D       Collared flycatcher  ==
B D       Medium ground finch  ==
B D                    Lizard  ==
  D          Peregrine falcon  ==
  D              Saker falcon  ==
B D                   Wallaby  ==
  D           Green seaturtle  ==
  D  Chinese softshell turtle  ==
            Black flying-fox  ==
B D          White rhinoceros  ==

Alignment block 26 of 484 in window, 79626434 - 79626434, 1 bps 
B D                     Human  t
B D                     Chimp  t
B D                   Gorilla  t
B D                 Orangutan  t
B D                    Gibbon  t
B D                    Rhesus  t
B D       Crab-eating macaque  t
B D                    Baboon  t
B D              Green monkey  t
B D                  Marmoset  t
B D           Squirrel monkey  t
B D                  Bushbaby  t
           Chinese tree shrew  t
                 Prairie vole  a
B D           Chinese hamster  a
               Golden hamster  a
B D            Naked mole-rat  g
B D                Guinea pig  g
                   Chinchilla  g
             Brush-tailed rat  g
B D                    Rabbit  t
B D                      Pika  t
B D                     Horse  g
B D                       Dog  t
              Star-nosed mole  t
B D                  Elephant  g
          Cape elephant shrew  g
B D                   Manatee  g
             Cape golden mole  g
B D                    Tenrec  a
                     Aardvark  g
B D                 Armadillo  t
B D                  Hedgehog  =
B D                     Shrew  =
B D                  Microbat  =
B D                  Squirrel  =
B D                       Rat  =
B D                     Mouse  =
      Lesser Egyptian jerboa  =
B D                     Sheep  =
            Tibetan antelope  =
        David's myotis (bat)  =
               Big brown bat  =
B D                       Cow  =
              Pacific walrus  =
B D                     Panda  =
               Domestic goat  =
                Killer whale  =
              Bactrian camel  =
B D                    Alpaca  =
B D                       Pig  -
B D                       Cat  =
B D                   Ferret   =
B D                   Dolphin  =
                Weddell seal  =
B D                   Megabat  =
B D                Coelacanth  =
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =
            Black flying-fox  =
B D          White rhinoceros  =

Inserts between block 26 and 27 in window
B D                    Horse 1bp
B D                      Dog 4bp

Alignment block 27 of 484 in window, 79626435 - 79626444, 10 bps 
B D                     Human  gagaa---ag----gt--c
B D                     Chimp  gagaa---ag----gt--c
B D                   Gorilla  gagaa---ag----gt--c
B D                 Orangutan  gagaa---ag----gt--a
B D                    Gibbon  gagaa---ag----gt--c
B D                    Rhesus  gagaa---ag----gt--c
B D       Crab-eating macaque  gagaa---ag----gt--c
B D                    Baboon  gagaa---ag----gt--c
B D              Green monkey  gagaa---ag----gt--c
B D                  Marmoset  gagaa---ag----gt--c
B D           Squirrel monkey  gagaa---ag----gt--c
B D                  Bushbaby  gagaa---ag----gtccc
           Chinese tree shrew  gagaa---ag----gt--c
                 Prairie vole  gggaa---ag----tt--c
B D           Chinese hamster  gacaa---ag----gt--t
               Golden hamster  gataa---ag----at--t
B D            Naked mole-rat  gagaa---gg----gc--c
B D                Guinea pig  gagaa---ggaagaag--c
                   Chinchilla  gagaa---gg----gt--c
             Brush-tailed rat  gagga---gg----gt--c
B D                    Rabbit  gagaa---gg----gt--c
B D                      Pika  gagaa---ga----gt--c
B D                     Horse  gagca---ag----gc--g
B D                       Cat  ----g---ag----aa--g
B D                       Dog  ----a---ag----at--g
             Black flying-fox  gagca---ag----gt--g
              Star-nosed mole  gagca---ag----gt--g
B D                  Elephant  gagaa---aa----gt--c
          Cape elephant shrew  gagag---ag----at--c
B D                   Manatee  gagaa---ag----gt--c
             Cape golden mole  gaggagctag----gc--c
B D                    Tenrec  gagag---ag----gt--c
                     Aardvark  gaga----ag----gt--c
B D                 Armadillo  gagaa---ag----gt--c
B D                  Hedgehog  ===================
B D                     Shrew  ===================
B D                  Microbat  ===================
B D                  Squirrel  ===================
B D                       Rat  ===================
B D                     Mouse  ===================
      Lesser Egyptian jerboa  ===================
B D                     Sheep  ===================
            Tibetan antelope  ===================
        David's myotis (bat)  ===================
               Big brown bat  ===================
B D                       Cow  ===================
              Pacific walrus  ===================
B D                     Panda  ===================
               Domestic goat  ===================
                Killer whale  ===================
              Bactrian camel  ===================
B D                    Alpaca  ===================
B D                       Pig  -------------------
B D                   Ferret   ===================
B D                   Dolphin  ===================
                Weddell seal  ===================
B D                   Megabat  ===================
B D                Coelacanth  ===================
B D                    Turkey  ===================
B D                   Chicken  ===================
  D              Mallard duck  ===================
          Tibetan ground jay  ===================
B D               Zebra finch  ===================
  D    White-throated sparrow  ===================
B D           Tasmanian devil  ===================
B D             X. tropicalis  ===================
  D            Painted turtle  ===================
B D        American alligator  ===================
B D                Budgerigar  ===================
B D                   Opossum  ===================
  D               Rock pigeon  ===================
  D       Collared flycatcher  ===================
B D       Medium ground finch  ===================
B D                    Lizard  ===================
  D          Peregrine falcon  ===================
  D              Saker falcon  ===================
B D                   Wallaby  ===================
  D           Green seaturtle  ===================
  D  Chinese softshell turtle  ===================
B D          White rhinoceros  ===================

Inserts between block 27 and 28 in window
B D                    Horse 2bp
B D                      Cat 4bp
B D                      Dog 3bp
            Black flying-fox 2bp
             Star-nosed mole 2bp

Alignment block 28 of 484 in window, 79626445 - 79626445, 1 bps 
B D                     Human  -c
B D                     Chimp  -c
B D                   Gorilla  -c
B D                 Orangutan  -c
B D                    Gibbon  -a
B D                    Rhesus  -c
B D       Crab-eating macaque  -c
B D                    Baboon  -c
B D              Green monkey  -c
B D                  Marmoset  -c
B D           Squirrel monkey  -c
B D                  Bushbaby  -c
           Chinese tree shrew  -c
                 Prairie vole  -c
B D           Chinese hamster  -t
               Golden hamster  -c
B D            Naked mole-rat  -c
B D                Guinea pig  -c
                   Chinchilla  -c
             Brush-tailed rat  -c
B D                    Rabbit  -c
B D                      Pika  -c
B D                       Pig  -c
B D                    Alpaca  -c
               Bactrian camel  -c
B D                   Dolphin  -c
                 Killer whale  -c
B D                     Horse  -c
B D          White rhinoceros  -c
B D                       Cat  -c
              Star-nosed mole  -c
B D                  Elephant  a-
          Cape elephant shrew  a-
B D                   Manatee  a-
             Cape golden mole  g-
B D                    Tenrec  c-
                     Aardvark  a-
B D                 Armadillo  a-
B D                  Hedgehog  ==
B D                     Shrew  ==
B D                  Microbat  ==
B D                  Squirrel  ==
B D                       Rat  ==
B D                     Mouse  ==
      Lesser Egyptian jerboa  ==
B D                     Sheep  ==
            Tibetan antelope  ==
        David's myotis (bat)  ==
               Big brown bat  ==
B D                       Cow  ==
              Pacific walrus  ==
B D                     Panda  ==
               Domestic goat  ==
B D                       Dog  ==
B D                   Ferret   ==
                Weddell seal  ==
B D                   Megabat  ==
B D                Coelacanth  ==
B D                    Turkey  ==
B D                   Chicken  ==
  D              Mallard duck  ==
          Tibetan ground jay  ==
B D               Zebra finch  ==
  D    White-throated sparrow  ==
B D           Tasmanian devil  ==
B D             X. tropicalis  ==
  D            Painted turtle  ==
B D        American alligator  ==
B D                Budgerigar  ==
B D                   Opossum  ==
  D               Rock pigeon  ==
  D       Collared flycatcher  ==
B D       Medium ground finch  ==
B D                    Lizard  ==
  D          Peregrine falcon  ==
  D              Saker falcon  ==
B D                   Wallaby  ==
  D           Green seaturtle  ==
  D  Chinese softshell turtle  ==
            Black flying-fox  ==

Alignment block 29 of 484 in window, 79626446 - 79626446, 1 bps 
B D                     Human  c
B D                     Chimp  c
B D                   Gorilla  c
B D                 Orangutan  c
B D                    Gibbon  c
B D                    Rhesus  c
B D       Crab-eating macaque  c
B D                    Baboon  c
B D              Green monkey  c
B D                  Marmoset  c
B D           Squirrel monkey  c
B D                  Bushbaby  c
           Chinese tree shrew  c
                 Prairie vole  c
B D           Chinese hamster  c
               Golden hamster  c
B D            Naked mole-rat  c
B D                Guinea pig  c
                   Chinchilla  c
             Brush-tailed rat  c
B D                    Rabbit  c
B D                      Pika  t
B D                       Pig  c
B D                    Alpaca  c
               Bactrian camel  c
B D                   Dolphin  c
                 Killer whale  c
B D                     Horse  c
B D          White rhinoceros  c
B D                       Dog  c
B D                   Ferret   c
B D                     Panda  c
               Pacific walrus  c
                 Weddell seal  c
             Black flying-fox  c
              Star-nosed mole  c
B D                  Elephant  c
          Cape elephant shrew  c
B D                   Manatee  c
             Cape golden mole  c
B D                    Tenrec  t
                     Aardvark  g
B D                 Armadillo  c
B D                  Hedgehog  =
B D                     Shrew  =
B D                  Microbat  =
B D                  Squirrel  =
B D                       Rat  =
B D                     Mouse  =
      Lesser Egyptian jerboa  =
B D                     Sheep  =
            Tibetan antelope  =
        David's myotis (bat)  =
               Big brown bat  =
B D                       Cow  =
               Domestic goat  =
B D                       Cat  -
B D                   Megabat  =
B D                Coelacanth  =
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =

Alignment block 30 of 484 in window, 79626447 - 79626452, 6 bps 
B D                     Human  agctg-g
B D                     Chimp  agctg-g
B D                   Gorilla  agctg-g
B D                 Orangutan  agctg-g
B D                    Gibbon  agctg-g
B D                    Rhesus  agctg-g
B D       Crab-eating macaque  agctg-g
B D                    Baboon  agctg-g
B D              Green monkey  agctg-g
B D                  Marmoset  agctg-g
B D           Squirrel monkey  agctg-g
B D                  Bushbaby  agctg-a
           Chinese tree shrew  tgctg-g
                 Prairie vole  aggtcgg
B D           Chinese hamster  aggtc-a
               Golden hamster  aggtt-g
B D            Naked mole-rat  agctg-g
B D                Guinea pig  agctg-g
                   Chinchilla  agctg-g
             Brush-tailed rat  agctg-g
B D                    Rabbit  ggctg-g
B D                      Pika  ggctg-a
B D                       Pig  tgcag-g
B D                    Alpaca  tgctg-g
               Bactrian camel  tgctg-g
B D                   Dolphin  ggctg-g
                 Killer whale  ggctg-g
             Tibetan antelope  agctg-g
B D                       Cow  agccg-g
B D                     Sheep  agctg-g
                Domestic goat  agctg-g
B D                     Horse  tacag-c
B D          White rhinoceros  tgctg-c
B D                       Cat  -gctg-c
B D                       Dog  agctg-g
B D                   Ferret   agcta-g
B D                     Panda  agctg-g
               Pacific walrus  agctg-g
                 Weddell seal  agctg-g
             Black flying-fox  tgctg-g
              Star-nosed mole  tgatg-g
B D                  Elephant  agctg-g
          Cape elephant shrew  agctg-g
B D                   Manatee  cgctg-g
             Cape golden mole  agcag-g
B D                    Tenrec  ggctg-g
                     Aardvark  agctg-g
B D                 Armadillo  agctg-g
B D                  Hedgehog  =======
B D                     Shrew  =======
B D                  Microbat  =======
B D                  Squirrel  =======
B D                       Rat  =======
B D                     Mouse  =======
      Lesser Egyptian jerboa  =======
        David's myotis (bat)  =======
               Big brown bat  =======
B D                   Megabat  =======
B D                Coelacanth  =======
B D                    Turkey  =======
B D                   Chicken  =======
  D              Mallard duck  =======
          Tibetan ground jay  =======
B D               Zebra finch  =======
  D    White-throated sparrow  =======
B D           Tasmanian devil  =======
B D             X. tropicalis  =======
  D            Painted turtle  =======
B D        American alligator  =======
B D                Budgerigar  =======
B D                   Opossum  =======
  D               Rock pigeon  =======
  D       Collared flycatcher  =======
B D       Medium ground finch  =======
B D                    Lizard  =======
  D          Peregrine falcon  =======
  D              Saker falcon  =======
B D                   Wallaby  =======
  D           Green seaturtle  =======
  D  Chinese softshell turtle  =======

Inserts between block 30 and 31 in window
B D           Naked mole-rat 63bp
B D               Guinea pig 62bp
                  Chinchilla 100bp
            Brush-tailed rat 291bp

Alignment block 31 of 484 in window, 79626453 - 79626454, 2 bps 
B D                     Human  ag
B D                     Chimp  ag
B D                   Gorilla  ag
B D                 Orangutan  ag
B D                    Gibbon  ag
B D                    Rhesus  ag
B D       Crab-eating macaque  ag
B D                    Baboon  ag
B D              Green monkey  ag
B D                  Marmoset  ag
B D           Squirrel monkey  ag
B D                  Bushbaby  aa
           Chinese tree shrew  aa
                 Prairie vole  gg
B D           Chinese hamster  tg
               Golden hamster  gg
B D                    Rabbit  ag
B D                      Pika  ag
B D                       Pig  ac
B D                    Alpaca  ac
               Bactrian camel  ac
B D                   Dolphin  ac
                 Killer whale  ac
             Tibetan antelope  at
B D                       Cow  at
B D                     Sheep  at
                Domestic goat  at
B D                     Horse  ag
B D          White rhinoceros  ac
B D                       Cat  ag
B D                       Dog  ac
B D                   Ferret   ac
B D                     Panda  ac
               Pacific walrus  ac
                 Weddell seal  ac
             Black flying-fox  c-
B D                  Hedgehog  ag
              Star-nosed mole  ac
B D                  Elephant  ag
          Cape elephant shrew  ag
B D                   Manatee  ag
             Cape golden mole  ag
B D                    Tenrec  gg
                     Aardvark  aa
B D                 Armadillo  ag
B D                     Shrew  ==
B D                  Microbat  ==
B D                  Squirrel  ==
B D                       Rat  ==
B D                     Mouse  ==
                  Chinchilla  ==
            Brush-tailed rat  ==
B D                Guinea pig  ==
B D            Naked mole-rat  ==
      Lesser Egyptian jerboa  ==
        David's myotis (bat)  ==
               Big brown bat  ==
B D                   Megabat  ==
B D                Coelacanth  ==
B D                    Turkey  ==
B D                   Chicken  ==
  D              Mallard duck  ==
          Tibetan ground jay  ==
B D               Zebra finch  ==
  D    White-throated sparrow  ==
B D           Tasmanian devil  ==
B D             X. tropicalis  ==
  D            Painted turtle  ==
B D        American alligator  ==
B D                Budgerigar  ==
B D                   Opossum  ==
  D               Rock pigeon  ==
  D       Collared flycatcher  ==
B D       Medium ground finch  ==
B D                    Lizard  ==
  D          Peregrine falcon  ==
  D              Saker falcon  ==
B D                   Wallaby  ==
  D           Green seaturtle  ==
  D  Chinese softshell turtle  ==

Alignment block 32 of 484 in window, 79626455 - 79626455, 1 bps 
B D                     Human  a
B D                     Chimp  a
B D                   Gorilla  a
B D                 Orangutan  a
B D                    Gibbon  a
B D                    Rhesus  a
B D       Crab-eating macaque  a
B D                    Baboon  a
B D              Green monkey  a
B D                  Marmoset  a
B D           Squirrel monkey  a
B D                  Bushbaby  a
           Chinese tree shrew  a
                 Prairie vole  a
B D           Chinese hamster  a
               Golden hamster  t
B D                    Rabbit  a
B D                      Pika  a
B D                       Pig  a
B D                    Alpaca  c
               Bactrian camel  c
B D                   Dolphin  g
                 Killer whale  g
             Tibetan antelope  g
B D                       Cow  g
B D                     Sheep  g
                Domestic goat  g
B D                     Horse  g
B D          White rhinoceros  a
B D                       Cat  c
B D                       Dog  c
B D                   Ferret   c
B D                     Panda  c
               Pacific walrus  c
                 Weddell seal  c
             Black flying-fox  a
                Big brown bat  a
B D                  Hedgehog  a
              Star-nosed mole  a
B D                  Elephant  a
          Cape elephant shrew  a
B D                   Manatee  a
             Cape golden mole  a
B D                    Tenrec  a
                     Aardvark  a
B D                 Armadillo  a
B D                     Shrew  =
B D                  Microbat  =
B D                  Squirrel  =
B D                       Rat  =
B D                     Mouse  =
                  Chinchilla  =
            Brush-tailed rat  =
B D                Guinea pig  =
B D            Naked mole-rat  =
      Lesser Egyptian jerboa  =
        David's myotis (bat)  =
B D                   Megabat  =
B D                Coelacanth  =
B D                    Turkey  =
B D                   Chicken  =
  D              Mallard duck  =
          Tibetan ground jay  =
B D               Zebra finch  =
  D    White-throated sparrow  =
B D           Tasmanian devil  =
B D             X. tropicalis  =
  D            Painted turtle  =
B D        American alligator  =
B D                Budgerigar  =
B D                   Opossum  =
  D               Rock pigeon  =
  D       Collared flycatcher  =
B D       Medium ground finch  =
B D                    Lizard  =
  D          Peregrine falcon  =
  D              Saker falcon  =
B D                   Wallaby  =
  D           Green seaturtle  =
  D  Chinese softshell turtle  =

Alignment block 33 of 484 in window, 79626456 - 79626464, 9 bps 
B D                     Human  acatagac----t-
B D                     Chimp  acatagac----t-
B D                   Gorilla  acatagac----t-
B D                 Orangutan  acatagac----t-
B D                    Gibbon  acatagac----t-
B D                    Rhesus  acatagac----t-
B D       Crab-eating macaque  acatagac----t-
B D                    Baboon  acatagac----t-
B D              Green monkey  acatagac----t-
B D                  Marmoset  acacagac----t-
B D           Squirrel monkey  acacagac----t-
B D                  Bushbaby  acacagcc----t-
           Chinese tree shrew  atgtacac----t-
B D                  Squirrel  ataccgac----t-
                 Prairie vole  -agaagac----t-
B D           Chinese hamster  -aggagac----t-
               Golden hamster  -aggagac----t-
B D                    Rabbit  acatggat----g-
B D                      Pika  a-------------
B D                       Pig  acacagac----g-
B D                    Alpaca  acacagac----g-
               Bactrian camel  acacagac----g-
B D                   Dolphin  acac--ag----g-
                 Killer whale  acac--ag----g-
             Tibetan antelope  gcacagag----g-
B D                       Cow  gcacagag----g-
B D                     Sheep  gcacagag----g-
                Domestic goat  gcacagag----g-
B D                     Horse  gcataggc---ca-
B D          White rhinoceros  acacggac---ga-
B D                       Cat  acccaggc----a-
B D                       Dog  acagaggc----a-
B D                   Ferret   acgtgggc----a-
B D                     Panda  acataggc----a-
               Pacific walrus  acacagac----a-
                 Weddell seal  acacagac----a-
             Black flying-fox  acatagac----g-
                Big brown bat  acacagat----g-
B D                  Hedgehog  gagcaagc----t-
              Star-nosed mole  gcatagat----a-
B D                  Elephant  gcctagat----tt
          Cape elephant shrew  ccctagtt----tt
B D                   Manatee  gcctagat----tt
             Cape golden mole  tgctagattttgtt
B D                    Tenrec  gcctcgctttagtt
                     Aardvark  gtctagac------
B D                 Armadillo  acatagac----tt
B D                     Shrew  ==============
B D                  Microbat  ==============
B D                       Rat  ==============
B D                     Mouse  ==============
                  Chinchilla  ==============
            Brush-tailed rat  ==============
B D                Guinea pig  ==============
B D            Naked mole-rat  ==============
      Lesser Egyptian jerboa  ==============
        David's myotis (bat)  ==============
B D                   Megabat  ==============
B D                Coelacanth  ==============
B D                    Turkey  ==============
B D                   Chicken  ==============
  D              Mallard duck  ==============
          Tibetan ground jay  ==============
B D               Zebra finch  ==============
  D    White-throated sparrow  ==============
B D           Tasmanian devil  ==============
B D             X. tropicalis  ==============
  D            Painted turtle  ==============
B D        American alligator  ==============
B D                Budgerigar  ==============
B D                   Opossum  ==============
  D               Rock pigeon  ==============
  D       Collared flycatcher  ==============
B D       Medium ground finch  ==============
B D                    Lizard  ==============
  D          Peregrine falcon  ==============
  D              Saker falcon  ==============
B D                   Wallaby  ==============
  D           Green seaturtle  ==============
  D  Chinese softshell turtle  ==============

Inserts between block 33 and 34 in window
B D                      Pig 1bp
B D                   Alpaca 1bp
              Bactrian camel 1bp
B D                  Dolphin 1bp
                Killer whale 1bp
            Tibetan antelope 1bp
B D                      Cow 1bp
B D                    Sheep 1bp
               Domestic goat 1bp
            Black flying-fox 1bp
               Big brown bat 1bp

Alignment block 34 of 484 in window, 79626465 - 79626510, 46 bps 
B D                     Human  tg------gg-g---ccacaagagaag---agggagggagt--gtgggaa----tggagg---tgcca
B D                     Chimp  tg------gg-g---ccacaagagaag---agggagggagt--gtgggaa----tcgagg---ttcca
B D                   Gorilla  tg------gg-g---ccacaagagaag---agggagggagt--gtgggaa----tggagg---tgcca
B D                 Orangutan  tg------gg-g---ccgcaagagaag---agggagggagt--gtgggaa----tggagg---tgcca
B D                    Gibbon  tg------gg-g---ccacaagagaag---agggagggggt--gtgggaa----tggagg---tgcca
B D                    Rhesus  cg------gg-g---ccacaagagaag---aaggagggaat--gtgggaa----tggagg---tgcca
B D       Crab-eating macaque  cg------gg-g---ccacaagagaag---aaggagggaat--gtgggaa----tggagg---tgcca
B D                    Baboon  cg------gg-g---ccacaagagaag---aaggagggaat--gtgggaa----tggagg---tacca
B D              Green monkey  cg------gg-g---ccacaagagaag---aaggagagaat--gtgggaa----tggagg---tgcca
B D                  Marmoset  tg------gg-g---ccacaagagaag---agaggagaggt--gtgggaa----tggagg---tgcca
B D           Squirrel monkey  tg------gg-g---ccacaagaggag---ggtgggga-tt--gtggaaa----tggagg---tgcca
B D                  Bushbaby  tg------gg-g---ccacaggagatg---agggagtgagc--atggaaa----tggagg---cgcca
           Chinese tree shrew  tg-----aaa-g---tcacaggagagg---agggaggaagc--atggaag----tggagg---cacca
B D                  Squirrel  tg------ag-g---ccacaggagaag---gggtagg---t--gtggaaa----t-ggag---gcccc
                 Prairie vole  tg------ag-ggaacc--------------------------------a----c-atgg---ctctg
B D           Chinese hamster  ta------ag-ggaaccacaggagaac---cagtgac---t--gtggaaa----c-aggg---atctg
               Golden hamster  ta------ag-ggaaccacaggagaac---cagtgag---t--gtgtaaa----c-atgg---ttctg
B D                    Rabbit  tg------ga-gg--ccacgggagaag---gggtgtg--------gacag----g-gaaa---tgcca
B D                      Pika  ----------------cacaggagaag---aggtgt--------------------gaaa---ctcca
B D                       Pig  -g------gg-g---ccaga-gagaag---agggg--------gtgg----------tgg---tgcca
B D                    Alpaca  gg------gg-g---ccaca-gagaag---aggggagggat--gtgg-aa----cggagg---tgcta
               Bactrian camel  gg------gg-g---ccaca-gagaag---aggggagggat--gtgg-aa----cggagg---tgcta
B D                   Dolphin  gg------gg-g---ccata-gagaaa---gggggaggggt--gtggaaa----tggagg---tacca
                 Killer whale  gg------gg-g---ccata-gagaaa---gggggaggggt--gtggaaa----tggagg---tacca
             Tibetan antelope  gg------gg-g---ccaca-gggaag---agggaggcag---gtgggaa----cagagg---tgcca
B D                       Cow  gg------gg-g---cctca-gggaag---aggggagcag---gtggcaa----cagagg---ttcca
B D                     Sheep  gg------gg-g---ccgca-gggaag---aggggagcag---gtgggaa----cagagg---tgcca
                Domestic goat  gg------gg-g---ccgca-gggaag---aggggagcag---gtgggaa----cagagg---tgcca
B D                     Horse  gg------gg-g---ccaca-gagaag---agggaagatat--gtggaaa----tggagg---cacca
B D          White rhinoceros  ga------gg-g---ccaca-gagaag---aggggaggtgt--gtgtaaa----tggagg---cacca
B D                       Cat  cg------gg-g---ccaca-gagagg---aggggaggggc--accagag----tggagg---catcg
B D                       Dog  tg------ga-g---tcaca-gagaag---tggggaggagt--atgcaaa----tagagg---taccg
B D                   Ferret   tg------gg-g---ccaca-gggaag----ggggcggggt--gagggaa----tggagg---cacca
B D                     Panda  cg------gg-g---ccata-agaa-g----ggggaggggt--gagggaa----tggagg---catca
               Pacific walrus  tg------gg-g---ccaca-gggaag----ggggaagagg--gagggaa----tggagg---cacca
                 Weddell seal  tg------gg-g---ccaca-ggga-------------------agggaa----tggagg---cacca
             Black flying-fox  gg------gg-g---ccaca-ga---------------ggc--atggaaa----tggagg---tacca
                Big brown bat  gg------ag-g---ccaca-gagaag---agggaaggggt--gtggaaa----tggagg---cgcca
         David's myotis (bat)  ggcaccacag-a---cgaca-gaaaag---agggaaggggt--gtaaaaa----tggagg---cacca
B D                  Microbat  ggcaccacag-a---cgaca-gagaag---agggaaggagt--gtggaaa----tggagg---cgcca
B D                  Hedgehog  gg------ga-g---ccacc-aagaag---aaaggagagat--gtgggaa----tttagg---tatca
              Star-nosed mole  tg------gg-g---tcac-----------agaaaaggggt--gtggaag----tggcgg---cagca
B D                  Elephant  ag------gg-g---ccaaagaag------agggagaaggt--gtggaat-----ggaggcatcatca
          Cape elephant shrew  ag------gc-a---ccacaggat------agagtgg------gaggaaa-----gaaga---caaca
B D                   Manatee  ag------gg-g---ccacagaag------agggagaaggt--gtggaat-----ggagg---catca
             Cape golden mole  ag------gg-g---ccatgggagatgaa-agttacagtgttggaggagaatattgaaag---tgtca
B D                    Tenrec  tg------ggag---tcacagaagacgggtggggagagtgt--gaggagg-----ggagg---tccct
                     Aardvark  ag------ag-g---ccacaggagaag---aggaggagagt--atggaat-----ggagg---cacca
B D                 Armadillo  gg------gg-a---ccacaggagatg---agggtgaggtg--gtggaaa----tggaag---tgcta
B D                     Shrew  ====================================================================
B D                       Rat  ====================================================================
B D                     Mouse  ====================================================================
                  Chinchilla  ====================================================================
            Brush-tailed rat  ====================================================================
B D                Guinea pig  ====================================================================
B D            Naked mole-rat  ====================================================================
      Lesser Egyptian jerboa  ====================================================================
B D                   Megabat  ====================================================================
B D                Coelacanth  ====================================================================
B D                    Turkey  ====================================================================
B D                   Chicken  ====================================================================
  D              Mallard duck  ====================================================================
          Tibetan ground jay  ====================================================================
B D               Zebra finch  ====================================================================
  D    White-throated sparrow  ====================================================================
B D           Tasmanian devil  ====================================================================
B D             X. tropicalis  ====================================================================
  D            Painted turtle  ====================================================================
B D        American alligator  ====================================================================
B D                Budgerigar  ====================================================================
B D                   Opossum  ====================================================================
  D               Rock pigeon  ====================================================================
  D       Collared flycatcher  ====================================================================
B D       Medium ground finch  ====================================================================
B D                    Lizard  ====================================================================
  D          Peregrine falcon  ====================================================================
  D              Saker falcon  ====================================================================
B D                   Wallaby  ====================================================================
  D           Green seaturtle  ====================================================================
  D  Chinese softshell turtle  ====================================================================

Inserts between block 34 and 35 in window
            Cape golden mole 359bp
B D                Armadillo 1bp

Alignment block 35 of 484 in window, 79626511 - 79626520, 10 bps 
B D                     Human  tcaaaggaga
B D                     Chimp  tcaaaggaga
B D                   Gorilla  tcaaaggaga
B D                 Orangutan  tcaaaggaga
B D                    Gibbon  tcaaagggga
B D                    Rhesus  tcaaaggaga
B D       Crab-eating macaque  tcaaaggaga
B D                    Baboon  tcaaaggaga
B D              Green monkey  tcaaaggaga
B D                  Marmoset  tcaaaggaga
B D           Squirrel monkey  ccaaaggaga
B D                  Bushbaby  tcaaaggaag
           Chinese tree shrew  tcaaa--aga
B D                  Squirrel  agcgtaggag
                 Prairie vole  cttaaggagg
B D           Chinese hamster  cttaaggagg
               Golden hamster  tttaaggagg
B D                    Rabbit  gccgaggaga
B D                      Pika  ----aggaga
B D                       Pig  tc--------
B D                    Alpaca  tcagaggaga
               Bactrian camel  tcagaggaga
B D                   Dolphin  tcaaaggaga
                 Killer whale  tcaaaggaga
             Tibetan antelope  gcaaaggaga
B D                       Cow  gcaaaggaga
B D                     Sheep  gcaaaggaga
                Domestic goat  gcaaacgaga
B D                     Horse  tcaaaggaga
B D          White rhinoceros  tcaaaggagg
B D                       Cat  tcgtaggaga
B D                       Dog  tcataggaga
B D                   Ferret   gtataagaga
B D                     Panda  tcacaggaga
               Pacific walrus  tcataagaga
                 Weddell seal  tcataagaga
             Black flying-fox  tcaaaggaga
                Big brown bat  tcgaagcaga
         David's myotis (bat)  tcaaagcaga
B D                  Microbat  tcaaagcaga
B D                  Hedgehog  ccaaaagaga
              Star-nosed mole  tc-aaggaga
B D                  Elephant  ttaaaggaga
          Cape elephant shrew  ctaaagaagc
B D                   Manatee  tcaaaggaga
             Cape golden mole  ttaaaggaga
B D                    Tenrec  ttaaaggaaa
                     Aardvark  ttaaaggaga
B D                 Armadillo  ctaagaaaaa
B D                     Shrew  ==========
B D                       Rat  ==========
B D                     Mouse  ==========
                  Chinchilla  ==========
            Brush-tailed rat  ==========
B D                Guinea pig  ==========
B D            Naked mole-rat  ==========
      Lesser Egyptian jerboa  ==========
B D                   Megabat  ==========
B D                Coelacanth  ==========
B D                    Turkey  ==========
B D                   Chicken  ==========
  D              Mallard duck  ==========
          Tibetan ground jay  ==========
B D               Zebra finch  ==========
  D    White-throated sparrow  ==========
B D           Tasmanian devil  ==========
B D             X. tropicalis  ==========
  D            Painted turtle  ==========
B D        American alligator  ==========
B D                Budgerigar  ==========
B D                   Opossum  ==========
  D               Rock pigeon  ==========
  D       Collared flycatcher  ==========
B D       Medium ground finch  ==========
B D                    Lizard  ==========
  D          Peregrine falcon  ==========
  D              Saker falcon  ==========
B D                   Wallaby  ==========
  D           Green seaturtle  ==========
  D  Chinese softshell turtle  ==========

Inserts between block 35 and 36 in window
B D                   Alpaca 2bp
              Bactrian camel 2bp
B D                  Dolphin 2bp
                Killer whale 2bp
            Tibetan antelope 2bp
B D                      Cow 2bp
B D                    Sheep 2bp
               Domestic goat 2bp
B D                    Horse 2bp
B D         White rhinoceros 2bp
B D                      Cat 2bp
B D                      Dog 2bp
B D                  Ferret  2bp
B D                    Panda 2bp
              Pacific walrus 2bp
                Weddell seal 2bp
            Black flying-fox 2bp
               Big brown bat 2bp
        David's myotis (bat) 2bp
B D                 Microbat 2bp
B D                 Hedgehog 418bp
             Star-nosed mole 2bp

Alignment block 36 of 484 in window, 79626521 - 79626526, 6 bps 
B D                     Human  --gaattc
B D                     Chimp  --gaattc
B D                   Gorilla  --gaattc
B D                 Orangutan  --gaattc
B D                    Gibbon  --gaattc
B D                    Rhesus  --gaattt
B D       Crab-eating macaque  --gaattt
B D                    Baboon  --gcattt
B D              Green monkey  --gaattt
B D                  Marmoset  --gaattt
B D           Squirrel monkey  --gaattt
B D                  Bushbaby  --gaattt
           Chinese tree shrew  --gaattt
B D                  Squirrel  --agaatg
                 Prairie vole  --accgcg
B D           Chinese hamster  --acagtg
               Golden hamster  --acattg
B D                    Rabbit  --gaatct
B D                      Pika  --gaatgt
B D                    Alpaca  --aaac--
               Bactrian camel  --aaac--
B D                   Dolphin  --aaac--
                 Killer whale  --aaac--
             Tibetan antelope  --aaat--
B D                       Cow  --aaat--
B D                     Sheep  --aaat--
                Domestic goat  --aaat--
B D                     Horse  --aaat--
B D          White rhinoceros  --aaag--
B D                       Cat  --acac--
B D                       Dog  --aaat--
B D                   Ferret   --aaat--
B D                     Panda  --aaac--
               Pacific walrus  --aaat--
                 Weddell seal  --aaat--
             Black flying-fox  --aaat--
                Big brown bat  --aaat--
         David's myotis (bat)  --aaat--
B D                  Microbat  --aaat--
              Star-nosed mole  --aaac--
B D                  Elephant  gaaaac--
          Cape elephant shrew  gaaggc--
B D                   Manatee  gaaaac--
             Cape golden mole  gaaagc--
B D                    Tenrec  gaaagc--
                     Aardvark  gccagc--
B D                 Armadillo  gagtgc--
B D                  Hedgehog  ========
B D                     Shrew  ========
B D                       Rat  ========
B D                     Mouse  ========
                  Chinchilla  ========
            Brush-tailed rat  ========
B D                Guinea pig  ========
B D            Naked mole-rat  ========
      Lesser Egyptian jerboa  ========
B D                       Pig  --------
B D                   Megabat  ========
B D                Coelacanth  ========
B D                    Turkey  ========
B D                   Chicken  ========
  D              Mallard duck  ========
          Tibetan ground jay  ========
B D               Zebra finch  ========
  D    White-throated sparrow  ========
B D           Tasmanian devil  ========
B D             X. tropicalis  ========
  D            Painted turtle  ========
B D        American alligator  ========
B D                Budgerigar  ========
B D                   Opossum  ========
  D               Rock pigeon  ========
  D       Collared flycatcher  ========
B D       Medium ground finch  ========
B D                    Lizard  ========
  D          Peregrine falcon  ========
  D              Saker falcon  ========
B D                   Wallaby  ========
  D           Green seaturtle  ========
  D  Chinese softshell turtle  ========

Alignment block 37 of 484 in window, 79626527 - 79626593, 67 bps 
B D                     Human  agagaagatattaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                     Chimp  agagaagatattaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                   Gorilla  agagaagatattaaggtcagga------ggttg---cgagattctagttttccacctc----------tc
B D                 Orangutan  agagaagatattaaagtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                    Gibbon  agagaagatattaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                    Rhesus  agaaaagatatgaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D       Crab-eating macaque  agaaaagatatgaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                    Baboon  agaaaagatatgaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D              Green monkey  agaaaagatacgaaggtcagga------ggtta---ggagattctagttttcaacctc----------tc
B D                  Marmoset  agagatgatattaaggtcagca------ggtta---agagattgtagttttcaacctc----------ta
B D           Squirrel monkey  agagatgatattaaggtcagca------ggtta---ggagattgtagttttcaacccc----------tc
B D                  Bushbaby  aaagaagataagaaggtcagga------tgttg---ggagattctag-tttcaacctc----------tt
           Chinese tree shrew  agagaagatactgaggtcatga------tgttg---ggagattccagctttcaacctc----------at
B D                  Squirrel  agagaagatatctatttcagga------tgttg---ggagattttagttttcaacttc----------tt
                 Prairie vole  agagaagatac--------aga------cattg---ggg-attcctgggttcagcttc----------tc
B D           Chinese hamster  agagaatttac--------aga------cattg---ggg-attccacagttcaacttc----------tc
               Golden hamster  agagaagctac--------aga------cattg---gga---ttcactattcaacttc----------tc
B D                    Rabbit  ggacaagacac-aaggtgagca------tgtga---ggagag--tggttttcaagctc----------tt
B D                      Pika  agacaaatgtt-aaggctagaa------agttg---ggagattctagctttc-ggcca----------tt
B D                       Pig  -----------caaggtcacga------tgtgg-------------------------------------
B D                    Alpaca  agagaagataacaaggtccgga------tgtgg---ggagcttctagctgtcaagctt----------tt
               Bactrian camel  agagaagataacaaggtccgga------tgtgg---ggagcttctagctgtcaagctt----------tt
B D                   Dolphin  acagccggtcaggaggttagga------tgcgg---ggagcttctagtt-ttcatcct----------ct
                 Killer whale  acagccggtcaggaggttagga------tgcgg---ggagcttctagtt-ttcatcct----------ct
             Tibetan antelope  ggagacagccatgaggccgggg------tgcgg-------------------cagcct----------tt
B D                       Cow  ggagactgcagtgaggccgggg------tgcag-------------------cagcct----------ct
B D                     Sheep  ggagacagccatgaggccgggg------tgcgg-------------------cagcct----------tt
                Domestic goat  ggagacagccatgaggccgggg------tgcgg-------------------cagcct----------tt
B D                     Horse  agaaaagatgttaaggtcagga------tgttg---ggggcttctaattttccatctc----------tt
B D          White rhinoceros  aaaaaagatattcaggtcagga------tgttg---ggagcttctaattttcaatctc----------tt
B D                       Cat  ggagaaggca-gaacatcagga------tgttg---ggagcttctagttttccgtctt----------cc
B D                       Dog  agagaagata-taacatcagga------tgttg---ggag-----------------------------c
B D                   Ferret   ggagaagata-tgacatcaggc------tgttg---ggag-----------------------------c
B D                     Panda  gaagaagata-taacatcagga------tgttg---ggag-----------------------------c
               Pacific walrus  ---gaagata-tgacaccagga------tgttg---ggag-----------------------------c
                 Weddell seal  ---gaagata-taacatcagga------tgttg---ggag-----------------------------c
             Black flying-fox  agggaaaatattaaggtcagga------tgttg---ggagcttctagtttttattctt----------tt
                Big brown bat  agggacgatattaaggtcagga------tgttg---ggagcttctagtttttaatccg----------tt
         David's myotis (bat)  agggaccatattaaagtcagga------cgttg---ggagcttctagtttttaatcgt----------tt
B D                  Microbat  agggaccatattaaggtcaggg------cgttg---ggagcttctagtttttaatctg----------tt
B D                  Hedgehog  aggggagagagtaag--caggaagctatttctg---ggagcttctagtttttaattttaatttccaagtt
              Star-nosed mole  agagacgatattaaggtcagga------tgttg---ggaacatctagtttctaat-------------ct
B