UCSC Genome Browser on Plasmodium falciparum 3D7 P. falciparum (pf47)
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Pf3D7_06_v3:652-1,432 781 bp.
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-   Mapping and Sequencing
Base Position
Restr Enzymes
Short Match
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ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O2 Stage: schizont Data type: RPKM of input
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O2 Stage: trophozoite Data type: RPKM of input
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep1 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: trophozoite Data type: RPKM of input
GFP Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
P. falciparum 3D7 genome annotation (release 47)
PfHP1 Stage: ring ChIP replicates: rep1 Data type: RPKM of ChIP
PfHP1 Stage: ring Data type: RPKM of input, rep1
PfHP1 Stage: schizont ChIP replicates: rep1 Data type: RPKM of ChIP
PfHP1 Stage: trophozoite ChIP replicates: rep1 Data type: RPKM of ChIP
PfHP1 Stage: trophozoite ChIP replicates: rep2 Data type: peaks
PfHP1 Stage: trophozoite Data type: RPKM of input, rep1
ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: ring Data type: RPKM of input
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: ring Data type: RPKM of input
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
GFP Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: ring ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: ring Data type: RPKM of input, rep2
PfHP1 Stage: schizont ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: trophozoite ChIP replicates: rep1 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: trophozoite ChIP replicates: rep1 Data type: peaks
PfHP1 Stage: trophozoite Data type: RPKM of input, rep2
ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-L Stage: schizont Data type: RPKM of input
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-O5 Stage: schizont Data type: RPKM of input
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep2 Data type: RPKM of ChIP
GFP Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
PfHP1 Stage: ring ChIP replicates: rep2 Data type: peaks
PfHP1 Stage: ring ChIP replicates: rep2 Data type: RPKM of ChIP
PfHP1 Stage: schizont ChIP replicates: rep2 Data type: peaks
PfHP1 Stage: schizont ChIP replicates: rep2 Data type: RPKM of ChIP
PfHP1 Stage: trophozoite ChIP replicates: rep2 Data type: RPKM of ChIP
ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-exp Stage: ring Data type: RPKM of input
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-L Stage: trophozoite Data type: RPKM of input
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
GFP Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: ring ChIP replicates: rep1 Data type: peaks
PfHP1 Stage: ring ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: schizont ChIP replicates: rep1 Data type: peaks
PfHP1 Stage: schizont ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
PfHP1 Stage: trophozoite ChIP replicates: rep2 Data type: log2-transformed ChIP/input fold enrichment
ApiAP2: PfAP2-exp Stage: schizont Data type: RPKM of input
GFP Stage: schizont Data type: RPKM of input
PfHP1 Stage: schizont Data type: RPKM of input, rep1
ApiAP2: PfAP2-exp Stage: trophozoite Data type: RPKM of input
PfHP1 Stage: schizont Data type: RPKM of input, rep2
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-L Stage: ring ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-L Stage: schizont ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-L Stage: trophozoite ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-O2 Stage: schizont ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-O2 Stage: trophozoite ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: ring ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: schizont ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-O5 Stage: trophozoite ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-exp Stage: ring ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-exp Stage: schizont ChIP replicates: rep2 Data type: peak summits
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep1 Data type: peak summits
ApiAP2: PfAP2-exp Stage: trophozoite ChIP replicates: rep2 Data type: peak summits
Plasmodium_falciparum pf
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